Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 CSF1R-201ENST00000286301 3989 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 HSPA8P16-201ENST00000454171 1865 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 UCA1-201ENST00000397381 2299 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC036108.3-201ENST00000564527 2677 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 GTF2H2B-204ENST00000513202 1954 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC122688.4-201ENST00000623279 4394 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AL512646.1-201ENST00000269395 1077 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 Y_RNA.25-201ENST00000362528 102 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 RNA5SP442-201ENST00000365050 107 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 SNORD113-1-201ENST00000365321 69 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 RNU6-108P-201ENST00000365558 107 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 Y_RNA.396-201ENST00000383949 103 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 RPS20P2-201ENST00000402520 389 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 OR4F1P-201ENST00000405102 938 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 RN7SKP266-201ENST00000410232 287 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 OR4F2P-201ENST00000424047 938 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AL139327.3-201ENST00000433721 379 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC009237.4-201ENST00000441078 238 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AL163973.1-201ENST00000484753 577 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AL031864.2-201ENST00000498507 350 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 ENPP7P10-201ENST00000504828 933 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 RPL39P5-202ENST00000512505 151 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 Y_RNA.665-201ENST00000516177 98 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 Y_RNA.680-201ENST00000516441 93 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 Y_RNA.721-201ENST00000517207 102 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 TMEM185AP1-201ENST00000524311 546 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AP003072.2-201ENST00000527756 676 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AL078601.3-201ENST00000573303 535 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 MIR3689F-201ENST00000579617 66 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC087645.1-201ENST00000588528 291 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC104184.1-201ENST00000607513 721 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC132825.5-201ENST00000640603 310 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 PNPT1P2-201ENST00000456768 2050 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC102941.1-201ENST00000567616 1537 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 CCDC33-203ENST00000398814 2787 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC8.32□□□□□ -1.08
LHX6Q9UPM6 AC114546.3-201ENST00000623582 1734 ntBASIC8.32□□□□□ -1.08
LHX6Q9UPM6 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.31□□□□□ -1.08
LHX6Q9UPM6 CDC27P3-201ENST00000635418 1910 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms