Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC022164.1-201ENST00000568767 2673 ntBASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HDAC6Q9UBN7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 Z68694.1-201ENST00000413929 841 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 RPL35AP3-201ENST00000414680 288 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC023141.9-201ENST00000458734 412 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC074386.1-201ENST00000476560 767 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC021733.2-201ENST00000518830 497 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC112191.2-201ENST00000522428 333 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC025857.1-201ENST00000525252 377 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AP000648.1-201ENST00000529682 397 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC079600.1-201ENST00000550326 297 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 MIR3189-201ENST00000578735 73 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 MIR4776-2-201ENST00000580204 80 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AL031601.1-201ENST00000605702 394 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 RN7SL787P-201ENST00000613000 284 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AL512624.1-201ENST00000613638 469 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC096861.1-201ENST00000616652 240 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AC243960.7-201ENST00000623532 707 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AL731532.1-201ENST00000623972 4236 ntBASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HDAC6Q9UBN7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 RBPJP7-201ENST00000442803 1447 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 RBPJP5-201ENST00000449433 1447 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 RNA5SP375-201ENST00000362975 119 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 FAM204CP-201ENST00000424489 642 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 AC064862.4-201ENST00000442180 334 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 DNAJC19P5-201ENST00000443295 316 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 AL445665.1-202ENST00000452436 324 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 RN7SL269P-201ENST00000467795 305 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 SNORD95-201ENST00000579879 68 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 COX6CP7-201ENST00000597056 208 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 AC141002.1-201ENST00000607025 279 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 AL137067.2-201ENST00000621202 131 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 Z95114.1-201ENST00000624264 14574 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 AP001541.1-201ENST00000623322 1904 ntBASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HDAC6Q9UBN7 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms