Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 RN7SKP206-201ENST00000410823 293 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 RN7SKP29-201ENST00000410957 272 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 MRPL53P1-201ENST00000414323 319 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 BX119321.1-201ENST00000428912 797 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AK3P5-201ENST00000432033 519 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 SUMO2P3-201ENST00000438311 288 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 RPS12P17-201ENST00000438591 377 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 CUBNP2-201ENST00000443534 1139 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 OR2AF1P-201ENST00000454899 889 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AL157777.1-201ENST00000468100 304 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 RN7SL174P-201ENST00000475578 289 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AC099521.1-201ENST00000482557 334 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 PPP1R11P1-201ENST00000486095 376 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AC020978.7-201ENST00000575953 1187 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AP001496.3-201ENST00000580230 913 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AC015802.2-201ENST00000589690 189 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AC009237.12-201ENST00000604755 742 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 RNA5SP440-201ENST00000612665 119 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 AL445670.1-201ENST00000618889 801 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 OR11H2-202ENST00000641517 1085 ntBASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CLCF1Q9UBD9 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AP000432.2-201ENST00000624164 2048 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 SNORA70H-201ENST00000383910 135 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 SNORA70J-201ENST00000384182 135 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 RN7SKP286-201ENST00000410894 299 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 SDHDP6-201ENST00000414693 480 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AC064862.4-201ENST00000442180 334 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 RPL36AP39-201ENST00000445859 318 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 RPS17P15-201ENST00000475609 349 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 PFN1P6-201ENST00000476786 399 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 RPL38P3-201ENST00000484463 213 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AC106872.4-201ENST00000510050 523 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 SNORA81.2-201ENST00000516868 170 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AC008429.4-201ENST00000521201 182 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AC027544.3-201ENST00000535082 757 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AC007066.2-202ENST00000566531 914 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AC010547.6-201ENST00000571789 193 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AL355974.3-201ENST00000617383 467 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AP003789.1-201ENST00000617737 605 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 MIR6729-201ENST00000618194 65 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AC021422.1-201ENST00000621212 473 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms