Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 OR52B5P-201ENST00000435337 951 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AC016027.4-201ENST00000450866 277 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AC010343.2-201ENST00000510162 224 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AL359704.2-201ENST00000604335 521 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AC019193.2-201ENST00000610012 634 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 OR52B5P-202ENST00000641118 1110 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 OR8B1P-202ENST00000641132 1178 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 RPL23AP18-201ENST00000416139 468 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AC117395.1-201ENST00000487390 403 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AC008629.2-201ENST00000503783 483 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 OR6M2P-201ENST00000529831 871 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AC011840.5-201ENST00000582125 771 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 AC026367.2-201ENST00000610630 553 ntBASIC5.41□□□□□ -1.54
CHD8Q9HCK8 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC5.41□□□□□ -1.54
CHD8Q9HCK8 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 AC011455.2-201ENST00000599320 3336 ntBASIC5.4□□□□□ -1.54
CHD8Q9HCK8 MFSD8-216ENST00000641147 4009 ntBASIC5.4□□□□□ -1.54
CHD8Q9HCK8 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 RNA5SP28-201ENST00000363841 119 ntBASIC5.4□□□□□ -1.54
CHD8Q9HCK8 RNU6-398P-201ENST00000384143 109 ntBASIC5.4□□□□□ -1.54
CHD8Q9HCK8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 SNORA58-201ENST00000505219 137 ntBASIC5.4□□□□□ -1.54
CHD8Q9HCK8 RNU6-941P-201ENST00000516346 108 ntBASIC5.4□□□□□ -1.54
CHD8Q9HCK8 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.4□□□□□ -1.54
CHD8Q9HCK8 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
CHD8Q9HCK8 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 OR11H13P-201ENST00000359695 979 ntBASIC5.4□□□□□ -1.55
CHD8Q9HCK8 RN7SKP28-201ENST00000364770 305 ntBASIC5.4□□□□□ -1.55
CHD8Q9HCK8 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 MIR134-201ENST00000385258 73 ntBASIC5.4□□□□□ -1.55
CHD8Q9HCK8 OR6D1P-201ENST00000436165 939 ntBASIC5.4□□□□□ -1.55
CHD8Q9HCK8 AC006335.2-201ENST00000437993 330 ntBASIC5.4□□□□□ -1.55
CHD8Q9HCK8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 AC114728.1-201ENST00000488289 483 ntBASIC5.4□□□□□ -1.55
CHD8Q9HCK8 RN7SL244P-201ENST00000493405 297 ntBASIC5.4□□□□□ -1.55
CHD8Q9HCK8 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 GARSP1-201ENST00000570895 719 ntBASIC5.4□□□□□ -1.55
CHD8Q9HCK8 AC069307.1-201ENST00000602820 447 ntBASIC5.4□□□□□ -1.55
CHD8Q9HCK8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD8Q9HCK8 AP001541.1-201ENST00000623322 1904 ntBASIC5.39□□□□□ -1.55
CHD8Q9HCK8 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHD8Q9HCK8 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms