Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MIR187-201ENST00000385062 109 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AL136310.1-201ENST00000404926 654 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC245060.4-201ENST00000413293 1121 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 SEPT7P8-201ENST00000413308 775 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AL589794.1-201ENST00000424971 390 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC245452.2-201ENST00000435222 392 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 NPM1P33-201ENST00000438918 872 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AL139156.3-201ENST00000454802 394 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC008280.2-201ENST00000455473 307 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 OR7E7P-201ENST00000455678 1012 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 RPL7P45-201ENST00000455851 743 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC063955.1-201ENST00000462872 685 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC091951.3-201ENST00000504093 246 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC092349.1-201ENST00000504903 310 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 MRPL57P6-201ENST00000506570 309 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC074087.1-201ENST00000512059 724 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 KCTD9P4-201ENST00000526766 1166 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 NXPE2P1-201ENST00000543705 726 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC004232.1-201ENST00000571388 208 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 DPRXP4-201ENST00000578053 568 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC104073.3-201ENST00000610942 955 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AL121895.2-201ENST00000619558 447 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC067852.7-201ENST00000623270 535 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 MIR1322-201ENST00000638013 71 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 AC110597.1-201ENST00000562669 3176 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 DDX18P5-201ENST00000534547 1306 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 YES1P1-201ENST00000418510 1628 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AP000526.1-201ENST00000603308 1388 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 RN7SKP184-201ENST00000362348 333 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 RNA5SP188-201ENST00000362916 129 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AC233289.1-201ENST00000403700 508 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AL360013.1-201ENST00000419031 858 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 CHCHD3P1-201ENST00000425516 676 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AL160175.1-201ENST00000428124 247 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 DNAJA1P5-201ENST00000440278 943 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 UBE2D3P4-201ENST00000441973 436 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 NPM1P49-201ENST00000448027 714 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 SRP68P2-201ENST00000456184 254 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 AL157777.1-201ENST00000468100 304 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 MYL6P4-201ENST00000477911 453 ntBASIC7.01□□□□□ -1.29
FOXP3Q9BZS1 RPL9P15-201ENST00000491096 532 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms