Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RPAP1Q9BWH6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.13□□□□□ -1.27
RPAP1Q9BWH6 MARK2P4-201ENST00000503381 2380 ntBASIC7.13□□□□□ -1.27
RPAP1Q9BWH6 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.13□□□□□ -1.27
RPAP1Q9BWH6 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.13□□□□□ -1.27
RPAP1Q9BWH6 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RPAP1Q9BWH6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
RPAP1Q9BWH6 MSL3P1-202ENST00000440028 1468 ntBASIC7.13□□□□□ -1.27
RPAP1Q9BWH6 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RPAP1Q9BWH6 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 SNORD1C-201ENST00000363315 78 ntBASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AK3P5-201ENST00000432033 519 ntBASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 KRT8P51-201ENST00000438938 274 ntBASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 MYO5BP2-201ENST00000449815 1277 ntBASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AC006530.1-201ENST00000555980 571 ntBASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AP001357.1-201ENST00000586304 1053 ntBASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 MIR193BHG-214ENST00000641765 509 ntBASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 KYNUP3-201ENST00000574386 1341 ntBASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 AC093297.3-201ENST00000607056 2517 ntBASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.12□□□□□ -1.27
RPAP1Q9BWH6 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 RNA5SP46-201ENST00000362370 120 ntBASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 SNORA64.1-201ENST00000362600 132 ntBASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 OR3A2-201ENST00000408891 1076 ntBASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 GTF3AP1-201ENST00000416942 1004 ntBASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 RPS12P17-201ENST00000438591 377 ntBASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 AC008629.2-201ENST00000503783 483 ntBASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 MIR4489-201ENST00000578869 62 ntBASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 AC027279.4-201ENST00000624371 2072 ntBASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RPAP1Q9BWH6 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 AL391422.1-201ENST00000402155 436 ntBASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 NME1P1-201ENST00000420914 382 ntBASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 AC002504.1-201ENST00000438281 691 ntBASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 AC026348.1-201ENST00000462549 1053 ntBASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 AC145423.1-201ENST00000605712 336 ntBASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
RPAP1Q9BWH6 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms