Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 RPL11P4-201ENST00000332269 436 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 SNORD94-201ENST00000386037 137 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 SETP15-201ENST00000412724 337 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC128677.1-201ENST00000436016 442 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 HMGN1P32-201ENST00000441744 256 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 RPS7P3-201ENST00000443360 580 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AL590004.3-202ENST00000445883 451 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC012512.1-201ENST00000446594 718 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC004129.2-201ENST00000457229 287 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 RNU1-88P-201ENST00000459274 128 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC114324.2-202ENST00000503812 134 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC134698.1-201ENST00000511619 643 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC110056.1-201ENST00000525759 911 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC106730.2-201ENST00000566641 540 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 MIR4732-201ENST00000581873 76 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AP005262.1-201ENST00000582646 997 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 AC036176.3-201ENST00000602456 418 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 MTCO1P46-201ENST00000451639 1491 ntBASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC28BQ9BUN5 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC217777.1-201ENST00000570034 1471 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC133552.1-201ENST00000569988 4007 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 SNORA21-201ENST00000362423 132 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 RNA5SP279-201ENST00000365513 117 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 SNORA70.6-201ENST00000383934 134 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 YWHAZP4-201ENST00000392459 708 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 MIR1266-201ENST00000408125 84 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 NPM1P40-201ENST00000412758 733 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 HYALP1-201ENST00000417674 1279 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AL445928.1-201ENST00000435545 222 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 TRIM60P16-201ENST00000444048 694 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC002553.3-201ENST00000453002 341 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 RPL31P11-202ENST00000454082 372 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 SNORD125-201ENST00000459538 96 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC036111.2-201ENST00000533247 901 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC068408.1-201ENST00000577406 1144 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 DPRXP4-201ENST00000578053 568 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 MIR4472-2-201ENST00000582069 67 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 SAMMSON-227ENST00000642114 1199 ntBASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC28BQ9BUN5 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC28BQ9BUN5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC28BQ9BUN5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC28BQ9BUN5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms