Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
VRK1Q99986 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
VRK1Q99986 AC079949.2-201ENST00000617117 2933 ntBASIC5.96□□□□□ -1.45
VRK1Q99986 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VRK1Q99986 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VRK1Q99986 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.96□□□□□ -1.45
VRK1Q99986 TRIM53CP-201ENST00000531490 1354 ntBASIC5.96□□□□□ -1.45
VRK1Q99986 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
VRK1Q99986 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK1Q99986 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
VRK1Q99986 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK1Q99986 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK1Q99986 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK1Q99986 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK1Q99986 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK1Q99986 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VRK1Q99986 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VRK1Q99986 RN7SKP189-201ENST00000365042 330 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VRK1Q99986 AC006511.2-201ENST00000388966 660 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK1Q99986 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK1Q99986 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK1Q99986 AL590806.1-201ENST00000415818 853 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 AL449283.1-202ENST00000418249 604 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 NAP1L4P2-201ENST00000425958 899 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK1Q99986 ZNF886P-201ENST00000450781 723 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 CEACAMP11-201ENST00000455211 583 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 HSPE1P22-201ENST00000456856 327 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 RN7SL372P-201ENST00000461982 298 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 AP000805.1-201ENST00000471604 784 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 AP005202.1-201ENST00000489915 867 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK1Q99986 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK1Q99986 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 SNORA81.2-201ENST00000516868 170 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 AP005902.2-201ENST00000518393 307 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK1Q99986 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK1Q99986 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK1Q99986 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.96□□□□□ -1.46
VRK1Q99986 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK1Q99986 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK1Q99986 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VRK1Q99986 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK1Q99986 AC087897.1-201ENST00000550134 156 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 AL132640.1-201ENST00000559594 619 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK1Q99986 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK1Q99986 AC004223.2-201ENST00000590309 544 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 CCDC58P3-201ENST00000590792 430 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 AC008751.2-201ENST00000597885 980 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 GAS5-AS1-201ENST00000602767 694 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 AL049840.5-201ENST00000602827 552 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 DUXAP3-201ENST00000603616 594 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.96□□□□□ -1.46
VRK1Q99986 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK1Q99986 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK1Q99986 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
VRK1Q99986 AC021755.4-201ENST00000616620 456 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 AC024023.1-201ENST00000624530 922 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK1Q99986 MTCO1P18-201ENST00000455518 1419 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK1Q99986 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.96□□□□□ -1.46
VRK1Q99986 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.96□□□□□ -1.46
VRK1Q99986 AC105114.1-201ENST00000624795 1862 ntBASIC5.96□□□□□ -1.46
VRK1Q99986 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VRK1Q99986 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
VRK1Q99986 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK1Q99986 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK1Q99986 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VRK1Q99986 DOCK11P1-201ENST00000553480 5932 ntBASIC5.95□□□□□ -1.46
VRK1Q99986 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK1Q99986 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.95□□□□□ -1.46
VRK1Q99986 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK1Q99986 AP002800.1-201ENST00000624982 2225 ntBASIC5.95□□□□□ -1.46
VRK1Q99986 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.95□□□□□ -1.46
VRK1Q99986 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK1Q99986 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.95□□□□□ -1.46
VRK1Q99986 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VRK1Q99986 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK1Q99986 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VRK1Q99986 AC022905.1-201ENST00000503430 3048 ntBASIC5.95□□□□□ -1.46
VRK1Q99986 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK1Q99986 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
VRK1Q99986 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VRK1Q99986 RN7SKP107-201ENST00000364157 290 ntBASIC5.95□□□□□ -1.46
VRK1Q99986 RNU4-7P-201ENST00000364758 141 ntBASIC5.95□□□□□ -1.46
VRK1Q99986 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.95□□□□□ -1.46
VRK1Q99986 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VRK1Q99986 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VRK1Q99986 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.95□□□□□ -1.46
VRK1Q99986 MIR551B-201ENST00000384984 96 ntBASIC5.95□□□□□ -1.46
VRK1Q99986 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VRK1Q99986 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.95□□□□□ -1.46
VRK1Q99986 AC119751.3-201ENST00000399720 670 ntBASIC5.95□□□□□ -1.46
VRK1Q99986 AC233289.1-201ENST00000403700 508 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms