Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC007346.2-201ENST00000564816 892 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AL583832.1-201ENST00000603227 784 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 CXADRP3-202ENST00000617265 1100 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC114774.1-201ENST00000507410 1770 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 CASC19-238ENST00000641523 1558 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC140479.2-201ENST00000421567 3130 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL21A1Q96P44 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL21A1Q96P44 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL21A1Q96P44 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL21A1Q96P44 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL21A1Q96P44 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 RNA5SP433-201ENST00000364491 114 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 MIR621-201ENST00000384919 96 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 SNRPEP6-201ENST00000407465 277 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 AL445466.1-201ENST00000448432 357 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 CFL1P4-201ENST00000451536 498 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 AC104164.1-201ENST00000460282 590 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 AL603882.1-201ENST00000463059 681 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 LSM3P4-201ENST00000502948 309 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 LDHAP1-201ENST00000509421 992 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 AC110056.1-201ENST00000525759 911 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 TOMM20P1-201ENST00000534518 427 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 AC090236.2-201ENST00000587933 1101 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 AL355974.3-201ENST00000617383 467 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 AC096708.4-201ENST00000620563 552 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 AC025262.3-201ENST00000623666 360 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL21A1Q96P44 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 RBPJP7-201ENST00000442803 1447 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 RBPJP5-201ENST00000449433 1447 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 AL158152.1-201ENST00000602652 1435 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 UGT2B24P-201ENST00000514441 1597 ntBASIC5.54□□□□□ -1.52
COL21A1Q96P44 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL21A1Q96P44 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL21A1Q96P44 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL21A1Q96P44 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
COL21A1Q96P44 QRSL1P1-201ENST00000400977 1540 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 BCORP1-203ENST00000513194 5093 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 AC012254.3-201ENST00000591183 2117 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 AC109446.4-201ENST00000623235 2755 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 RNA5SP211-201ENST00000365516 117 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 METTL15P3-201ENST00000415522 1221 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 AC117434.1-201ENST00000419971 836 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 AC005077.1-201ENST00000449226 375 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 PFN1P6-201ENST00000476786 399 ntBASIC5.53□□□□□ -1.52
COL21A1Q96P44 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL21A1Q96P44 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.53□□□□□ -1.52
COL21A1Q96P44 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms