Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC110373.1-201ENST00000505994 3505 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 OR56A4-201ENST00000330728 1209 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 MIR133A2-201ENST00000347538 102 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 U3.52-201ENST00000384034 216 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 MTND4P11-201ENST00000417020 1058 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 GAPDHP34-201ENST00000432112 823 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 RPSAP32-201ENST00000432681 526 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AL645638.1-201ENST00000440519 361 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 TVP23BP2-201ENST00000455082 615 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 ATP5G1P3-201ENST00000463301 410 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC108729.2-201ENST00000476543 840 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC093801.2-201ENST00000503966 1050 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 PCNAP1-201ENST00000505363 709 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC093816.1-201ENST00000515076 913 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC110760.3-202ENST00000515177 371 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC097486.1-201ENST00000515331 210 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 RNU6-491P-201ENST00000516099 110 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 NPM1P52-201ENST00000518264 846 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC113192.3-201ENST00000529152 742 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AP001496.3-201ENST00000580230 913 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC245884.10-201ENST00000597355 337 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC012368.3-201ENST00000604190 219 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC005277.2-201ENST00000617898 390 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 MIR6085-201ENST00000618314 110 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AP003499.2-201ENST00000624100 483 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 CUL4AP1-201ENST00000514750 1863 ntBASIC6.17□□□□□ -1.42
VPS50Q96JG6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
VPS50Q96JG6 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS50Q96JG6 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC011815.2-201ENST00000618230 2021 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AL353692.2-201ENST00000407054 335 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 MRPS21P5-201ENST00000417885 231 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS50Q96JG6 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 NPM1P26-201ENST00000426339 738 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC003989.1-201ENST00000434569 565 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC009237.1-201ENST00000442127 744 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS50Q96JG6 AL020997.1-201ENST00000446554 349 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 EIF2S2P5-201ENST00000457635 968 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 CTSLP6-201ENST00000458273 1002 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC090602.1-201ENST00000469695 252 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 AC114728.1-201ENST00000488289 483 ntBASIC6.16□□□□□ -1.42
VPS50Q96JG6 RN7SL362P-201ENST00000494228 267 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms