Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LRCH3Q96II8 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LRCH3Q96II8 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 OR6M2P-202ENST00000641780 2063 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 METTL21EP-201ENST00000298105 713 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 Y_RNA.1-201ENST00000352915 104 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 SSX9-201ENST00000376909 591 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 Y_RNA.474-201ENST00000384341 102 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 MED28P1-201ENST00000399158 571 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 MIR1282-201ENST00000408865 101 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 RNA5SP118-201ENST00000410385 109 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 SDCBPP2-201ENST00000424643 885 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 AL356583.2-201ENST00000426536 280 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 DDX11L10-201ENST00000430178 571 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC243962.1-201ENST00000441512 579 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 NDUFA5P7-201ENST00000452914 242 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 CEACAMP4-201ENST00000457676 421 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 RPL7P48-201ENST00000461513 746 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 MTCO2P29-201ENST00000465212 189 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 RBMS2P1-201ENST00000525031 1226 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AP003122.4-201ENST00000530980 758 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 OR5BN1P-201ENST00000532955 829 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC020914.6-201ENST00000594327 272 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC005070.2-201ENST00000604391 260 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC016925.2-201ENST00000605108 242 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AL355472.4-201ENST00000610233 626 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LRCH3Q96II8 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC002401.3-201ENST00000620020 440 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 TPTEP1-208ENST00000636884 213 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LRCH3Q96II8 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LRCH3Q96II8 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LRCH3Q96II8 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
LRCH3Q96II8 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LRCH3Q96II8 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
LRCH3Q96II8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
LRCH3Q96II8 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 AC015871.4-201ENST00000624650 2260 ntBASIC8.59□□□□□ -1.03
LRCH3Q96II8 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC8.59□□□□□ -1.03
LRCH3Q96II8 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.59□□□□□ -1.04
LRCH3Q96II8 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.59□□□□□ -1.04
LRCH3Q96II8 AL591848.3-201ENST00000570141 2968 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
LRCH3Q96II8 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LRCH3Q96II8 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LRCH3Q96II8 NF1P1-201ENST00000604105 2645 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
LRCH3Q96II8 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
LRCH3Q96II8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
LRCH3Q96II8 SNORD42.2-201ENST00000365570 69 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 MIR568-201ENST00000385036 95 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 AL049693.1-201ENST00000402760 611 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 RN7SKP146-201ENST00000410242 334 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 RN7SKP240-201ENST00000410583 375 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC009161.1-201ENST00000417306 376 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 RPL5P6-201ENST00000425640 886 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC073900.1-201ENST00000429766 776 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC234064.1-201ENST00000436312 247 ntBASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.58□□□□□ -1.04
LRCH3Q96II8 Y_RNA.631-201ENST00000459607 101 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms