Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL352984.2-202ENST00000613699 155 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AC006249.1-201ENST00000621223 471 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AP001002.1-201ENST00000625148 1513 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC005261.6-201ENST00000623072 1387 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 RNA5SP346-201ENST00000363541 121 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 NME1P1-201ENST00000420914 382 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 RPSAP40-201ENST00000442343 891 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AL355032.1-201ENST00000472981 438 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC091874.2-201ENST00000505889 720 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC095052.1-201ENST00000509955 863 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC108103.1-201ENST00000511286 446 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 OR4A46P-201ENST00000527255 933 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 CR383656.14-201ENST00000551951 406 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC007494.1-201ENST00000562293 760 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 NPIPB1P-202ENST00000588786 828 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC003992.1-201ENST00000635364 557 ntBASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CHMP4CQ96CF2 IMMTP1-201ENST00000435590 2219 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 DDX6P1-205ENST00000441966 1436 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC096921.2-201ENST00000561507 1916 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 RNA5SP198-201ENST00000410376 127 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC016027.5-201ENST00000427227 210 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 H3F3BP1-201ENST00000440551 403 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 HMGN1P2-201ENST00000445197 310 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 ZNF736P6Y-201ENST00000447526 1213 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AL358876.1-201ENST00000453364 1075 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 RANP2-201ENST00000456833 229 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 RN7SL254P-201ENST00000460609 284 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC022336.1-201ENST00000475510 337 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 RPL34P33-201ENST00000486062 334 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 OR4D12P-201ENST00000509361 911 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 RN7SKP67-201ENST00000515905 235 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 RNU6-491P-201ENST00000516099 110 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC019227.1-201ENST00000526902 510 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 OR4A40P-201ENST00000533878 948 ntBASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.37□□□□□ -1.23
CHMP4CQ96CF2 DPPA3P2-202ENST00000557188 1219 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms