Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 AC243960.7-201ENST00000623532 707 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 MSL3P1-202ENST00000440028 1468 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF4Q92544 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF4Q92544 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF4Q92544 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF4Q92544 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF4Q92544 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF4Q92544 RNA5SP478-201ENST00000364657 115 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 MTND3P20-201ENST00000407663 186 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 CDY17P-201ENST00000414121 1282 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 RPL12P12-201ENST00000424633 501 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC079922.1-201ENST00000443291 359 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 RANP2-201ENST00000456833 229 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AL035690.1-201ENST00000490892 383 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 PSMA2P2-201ENST00000504319 686 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC093815.1-201ENST00000508637 280 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 SNORD46.2-201ENST00000516021 102 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 Y_RNA.710-201ENST00000516975 110 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 EIF1AXP2-201ENST00000555940 413 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC091078.2-201ENST00000557145 559 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC092121.1-201ENST00000569452 202 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 MIR3189-201ENST00000578735 73 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 OOSP1P2-201ENST00000579644 351 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC068768.2-201ENST00000602352 343 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AL021368.3-201ENST00000607119 578 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 AL008723.3-201ENST00000608926 449 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 MIR6793-201ENST00000612376 63 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC073488.3-201ENST00000631611 778 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF4Q92544 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AC005261.2-201ENST00000593427 4258 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TM9SF4Q92544 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF4Q92544 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TM9SF4Q92544 AL121768.1-201ENST00000613917 2544 ntBASIC5.7□□□□□ -1.5
TM9SF4Q92544 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF4Q92544 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF4Q92544 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
TM9SF4Q92544 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TM9SF4Q92544 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF4Q92544 AP002512.4-202ENST00000641599 4530 ntBASIC5.69□□□□□ -1.5
TM9SF4Q92544 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF4Q92544 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TM9SF4Q92544 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.69□□□□□ -1.5
TM9SF4Q92544 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TM9SF4Q92544 RNA5SP477-201ENST00000362639 119 ntBASIC5.69□□□□□ -1.5
TM9SF4Q92544 SNORA51.1-201ENST00000363243 140 ntBASIC5.69□□□□□ -1.5
TM9SF4Q92544 NPM1P38-201ENST00000403835 865 ntBASIC5.69□□□□□ -1.5
TM9SF4Q92544 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.69□□□□□ -1.5
TM9SF4Q92544 AC015977.1-201ENST00000418887 292 ntBASIC5.69□□□□□ -1.5
TM9SF4Q92544 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.69□□□□□ -1.5
TM9SF4Q92544 AC092651.1-201ENST00000426110 312 ntBASIC5.69□□□□□ -1.5
TM9SF4Q92544 RPS7P14-201ENST00000426405 583 ntBASIC5.69□□□□□ -1.5
TM9SF4Q92544 MTND6P12-201ENST00000428247 522 ntBASIC5.69□□□□□ -1.5
TM9SF4Q92544 CDY8P-201ENST00000428380 1279 ntBASIC5.69□□□□□ -1.5
TM9SF4Q92544 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms