Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 RN7SKP292-201ENST00000365522 317 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 MIR1203-201ENST00000408812 85 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 RN7SKP161-201ENST00000411110 305 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AL035660.1-201ENST00000422041 222 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 BX323845.3-201ENST00000428215 527 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC073508.1-201ENST00000428866 656 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 UBE2V1P6-201ENST00000430840 422 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 SCAND3P1-201ENST00000439854 1060 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 Z99127.2-201ENST00000441426 334 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 ZNF619P1-201ENST00000446539 752 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 MGAT2P1-201ENST00000449718 797 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC092865.4-201ENST00000477936 615 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 RN7SL284P-201ENST00000498823 275 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 SUMO2P19-201ENST00000518920 295 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 ZNF322P1-201ENST00000568013 1209 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AL133247.2-201ENST00000603236 482 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC009237.12-201ENST00000604755 742 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AL645933.2-201ENST00000606743 1207 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AP005431.1-201ENST00000618479 319 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC093909.5-201ENST00000621839 1799 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 RNA5SP350-201ENST00000363298 111 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 SNORA43.1-201ENST00000364863 140 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 RNU6-40P-201ENST00000384254 107 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 RNU6-1176P-201ENST00000390955 107 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 ST13P16-201ENST00000401760 781 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 RN7SKP286-201ENST00000410894 299 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC245060.4-201ENST00000413293 1121 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC016908.1-201ENST00000442571 1219 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 TRIM60P16-201ENST00000444048 694 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 GAPDHP23-201ENST00000444823 993 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC015908.1-201ENST00000478739 476 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC090543.1-201ENST00000492168 485 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC138409.2-202ENST00000507274 458 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 RNU6-889P-201ENST00000517189 103 ntBASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGB4Q8WW32 AC084337.1-201ENST00000524809 686 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms