Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AC097359.1-201ENST00000447946 463 ntBASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 GUSBP9-201ENST00000510138 584 ntBASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AC093664.1-201ENST00000511779 289 ntBASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 GAPDHP62-201ENST00000515313 990 ntBASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 MIR4310-201ENST00000582950 57 ntBASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 HIRAP1-201ENST00000605318 787 ntBASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC112Q8NEF3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 RNU1-65P-201ENST00000363919 148 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 SNORA11.3-201ENST00000408471 128 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 GPS2P1-201ENST00000411761 986 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 VN1R21P-201ENST00000426703 765 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC099677.3-201ENST00000427081 395 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 NPM1P25-201ENST00000429734 854 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC016027.4-201ENST00000450866 277 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC006539.1-201ENST00000481419 501 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 RNA5SP230-201ENST00000517039 122 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 CYCSP25-201ENST00000525280 316 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC009852.2-201ENST00000567898 485 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC010487.1-201ENST00000594408 1172 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 WBP1LP12-201ENST00000604449 331 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 MIR6778-201ENST00000617912 73 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 SNORA11.6-201ENST00000619030 128 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 MIR6811-201ENST00000620409 58 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AL683826.1-201ENST00000624104 627 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC010325.3-201ENST00000641084 394 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 AC018809.2-201ENST00000602436 3823 ntBASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC112Q8NEF3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 RNA5SP91-201ENST00000390902 119 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 RN7SKP144-201ENST00000411108 279 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 AL096829.1-201ENST00000413677 457 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 OR10T1P-201ENST00000424327 947 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 RPL12P11-201ENST00000439970 501 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 RPS10P18-201ENST00000442662 495 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 OR2L9P-201ENST00000444456 913 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 AC083795.1-201ENST00000491760 320 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 RN7SL104P-201ENST00000498686 293 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 MIR2117-201ENST00000516780 80 ntBASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC112Q8NEF3 AP001823.1-201ENST00000604056 1003 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms