Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SOCS5P3-201ENST00000425115 1576 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 RN7SKP81-201ENST00000365603 331 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 MIR301B-201ENST00000390813 78 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC003045.1-201ENST00000398779 713 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 SNORA79B-201ENST00000410557 148 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 RPL35AP31-201ENST00000418340 337 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 OR10T1P-201ENST00000424327 947 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 PSMD8P1-201ENST00000436275 769 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 ARAFP2-201ENST00000440565 559 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AL645936.1-201ENST00000441979 518 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 MED28P3-201ENST00000444288 531 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC097359.1-201ENST00000447946 463 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AL359839.1-201ENST00000451975 1160 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 NPM1P9-201ENST00000453156 844 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC006539.1-201ENST00000481419 501 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 RPL38P3-201ENST00000484463 213 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC009567.2-201ENST00000502989 349 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC008126.1-201ENST00000549019 480 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 MRPL45P2-203ENST00000573318 473 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC027216.1-201ENST00000577726 685 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AL031429.2-201ENST00000602605 649 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 HIRAP1-201ENST00000605318 787 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC096861.1-201ENST00000616652 240 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC087821.1-201ENST00000623639 567 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC012254.3-201ENST00000591183 2117 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 CASC19-248ENST00000641674 1356 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC022325.1-201ENST00000502748 2199 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 FANCD2P2-201ENST00000437591 1400 ntBASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC71LQ8N9Z2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 RN7SKP69-201ENST00000365390 305 ntBASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 MRPL32P1-201ENST00000406301 247 ntBASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 RNA5SP296-201ENST00000410523 111 ntBASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 AC094019.1-201ENST00000434678 472 ntBASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 RN7SL39P-201ENST00000462264 297 ntBASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 ABCC13-202ENST00000463099 3842 ntBASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 RPL34P33-201ENST00000486062 334 ntBASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 GAPDHP62-201ENST00000515313 990 ntBASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 RNA5SP206-201ENST00000516703 121 ntBASIC4.87□□□□□ -1.63
CCDC71LQ8N9Z2 MIR2117-201ENST00000516780 80 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms