Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 LINC00556-201ENST00000569603 412 ntBASIC5.6□□□□□ -1.51
CCDC71Q8IV32 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 AL512652.1-201ENST00000619006 500 ntBASIC5.6□□□□□ -1.51
CCDC71Q8IV32 AC087821.1-201ENST00000623639 567 ntBASIC5.6□□□□□ -1.51
CCDC71Q8IV32 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 AC109446.4-201ENST00000623235 2755 ntBASIC5.6□□□□□ -1.51
CCDC71Q8IV32 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 AC232271.1-201ENST00000602455 2715 ntBASIC5.6□□□□□ -1.51
CCDC71Q8IV32 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC71Q8IV32 KARSP1-201ENST00000451871 1752 ntBASIC5.6□□□□□ -1.51
CCDC71Q8IV32 AL359091.1-201ENST00000449048 1734 ntBASIC5.6□□□□□ -1.51
CCDC71Q8IV32 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 OR7E25P-201ENST00000344844 931 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AC023490.2-201ENST00000359859 470 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 RN7SKP69-201ENST00000365390 305 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AL691447.1-201ENST00000419456 387 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AC104843.2-201ENST00000427666 297 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 OR5H7P-201ENST00000514084 930 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AC092865.1-201ENST00000544395 1023 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AC016839.1-201ENST00000578162 867 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AC100767.2-201ENST00000604840 693 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AP000894.4-201ENST00000610185 483 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AL354950.1-201ENST00000614150 568 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AC069542.2-201ENST00000624816 216 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 NLRP3P1-201ENST00000622303 1785 ntBASIC5.59□□□□□ -1.51
CCDC71Q8IV32 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC71Q8IV32 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
CCDC71Q8IV32 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.59□□□□□ -1.52
CCDC71Q8IV32 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
CCDC71Q8IV32 AL133243.2-201ENST00000610331 1621 ntBASIC5.59□□□□□ -1.52
CCDC71Q8IV32 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.59□□□□□ -1.52
CCDC71Q8IV32 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCDC71Q8IV32 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.59□□□□□ -1.52
CCDC71Q8IV32 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AL355488.2-201ENST00000609909 2850 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC125336.1-201ENST00000508893 2827 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 SUGT1P2-201ENST00000379452 992 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AL031985.1-201ENST00000392713 418 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC245096.1-201ENST00000413104 546 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 GAPDHP75-201ENST00000433910 943 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 HIGD1AP16-201ENST00000450986 258 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 RN7SL326P-201ENST00000477493 296 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 MTATP6P1-201ENST00000514057 681 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 snoU109.5-201ENST00000516231 132 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 TPM3P3-201ENST00000521343 354 ntBASIC5.58□□□□□ -1.52
CCDC71Q8IV32 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.58□□□□□ -1.52
CCDC71Q8IV32 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms