Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
BHLHA9Q7RTU4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
BHLHA9Q7RTU4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BHLHA9Q7RTU4 RNF19BPY-201ENST00000458209 1550 ntBASIC6.09□□□□□ -1.43
BHLHA9Q7RTU4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BHLHA9Q7RTU4 AL161901.1-201ENST00000624954 3425 ntBASIC6.09□□□□□ -1.44
BHLHA9Q7RTU4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.09□□□□□ -1.44
BHLHA9Q7RTU4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.44
BHLHA9Q7RTU4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
BHLHA9Q7RTU4 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.09□□□□□ -1.44
BHLHA9Q7RTU4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL159987.1-201ENST00000347911 293 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL031985.1-201ENST00000392713 418 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 RPS26P38-201ENST00000414476 348 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 MTCYBP7-201ENST00000419540 1134 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 TRIM60P13-201ENST00000432350 1283 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 DEFA9P-201ENST00000433042 285 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC096775.1-201ENST00000437724 448 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC023141.8-201ENST00000442554 208 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC006539.1-201ENST00000481419 501 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC009120.1-201ENST00000493458 473 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AP001804.1-201ENST00000526868 919 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC135279.1-201ENST00000543493 504 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC006115.2-201ENST00000596823 202 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AP003117.1-201ENST00000602771 554 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 FAM27E4-201ENST00000605259 342 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL162574.2-201ENST00000614618 657 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC084824.4-201ENST00000620106 731 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AL117339.4-201ENST00000608335 7063 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC015689.2-201ENST00000528172 1738 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AC106872.5-201ENST00000508856 1416 ntBASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
BHLHA9Q7RTU4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 MIR375-201ENST00000362103 64 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 SNORD1C-201ENST00000363315 78 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 RNA5SP510-201ENST00000364697 99 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 OR5W1P-201ENST00000423705 938 ntBASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BHLHA9Q7RTU4 AC104843.2-201ENST00000427666 297 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms