Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
CCDC141Q6ZP82 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.5□□□□□ -1.05
CCDC141Q6ZP82 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
CCDC141Q6ZP82 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC141Q6ZP82 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CCDC141Q6ZP82 SPATA31C1-201ENST00000420021 3895 ntBASIC8.5□□□□□ -1.05
CCDC141Q6ZP82 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
CCDC141Q6ZP82 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
CCDC141Q6ZP82 AC009948.3-201ENST00000603415 1798 ntBASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 AC005294.1-201ENST00000355509 281 ntBASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 RPL7P39-201ENST00000481157 744 ntBASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 AC023818.1-201ENST00000498379 384 ntBASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 AL121612.2-201ENST00000612261 482 ntBASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 ZNF658B-201ENST00000602828 3408 ntBASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
CCDC141Q6ZP82 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 AC073429.2-201ENST00000569694 1444 ntBASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 MRRFP1-201ENST00000435941 1675 ntBASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 RN7SKP125-201ENST00000410481 302 ntBASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 RPS27P18-201ENST00000431701 247 ntBASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 RPS23P2-201ENST00000463671 415 ntBASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 RPL7AP6-201ENST00000477943 801 ntBASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 TRBV5-2-201ENST00000489095 273 ntBASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 AC072052.1-201ENST00000496556 306 ntBASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 AC007346.2-201ENST00000564816 892 ntBASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CCDC141Q6ZP82 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 AL445687.2-201ENST00000458156 728 ntBASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 CBX1P5-201ENST00000475330 559 ntBASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 RBM22P1-201ENST00000578589 1214 ntBASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 AC116651.1-201ENST00000609724 556 ntBASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 AC012213.2-201ENST00000562917 4597 ntBASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 NBPF8-201ENST00000583271 5330 ntBASIC8.47□□□□□ -1.05
CCDC141Q6ZP82 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.46□□□□□ -1.05
CCDC141Q6ZP82 AC022819.1-201ENST00000563495 3910 ntBASIC8.46□□□□□ -1.05
CCDC141Q6ZP82 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC8.46□□□□□ -1.05
CCDC141Q6ZP82 RNA5SP514-201ENST00000363717 111 ntBASIC8.46□□□□□ -1.05
CCDC141Q6ZP82 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms