Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
VCPP55072 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VCPP55072 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VCPP55072 U3.7-201ENST00000363668 216 ntBASIC6.47□□□□□ -1.37
VCPP55072 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.47□□□□□ -1.37
VCPP55072 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.47□□□□□ -1.37
VCPP55072 AP000534.2-201ENST00000412729 568 ntBASIC6.47□□□□□ -1.37
VCPP55072 AC015977.1-201ENST00000418887 292 ntBASIC6.47□□□□□ -1.37
VCPP55072 AC130360.1-201ENST00000425489 1117 ntBASIC6.47□□□□□ -1.37
VCPP55072 BX323845.3-201ENST00000428215 527 ntBASIC6.47□□□□□ -1.37
VCPP55072 RPL34P27-201ENST00000428810 349 ntBASIC6.47□□□□□ -1.37
VCPP55072 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.47□□□□□ -1.37
VCPP55072 UBE2V2P4-201ENST00000447495 259 ntBASIC6.47□□□□□ -1.37
VCPP55072 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.47□□□□□ -1.37
VCPP55072 HIGD1AP16-201ENST00000450986 258 ntBASIC6.47□□□□□ -1.37
VCPP55072 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.47□□□□□ -1.37
VCPP55072 PFN1P6-201ENST00000476786 399 ntBASIC6.47□□□□□ -1.37
VCPP55072 RN7SL326P-201ENST00000477493 296 ntBASIC6.47□□□□□ -1.37
VCPP55072 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.47□□□□□ -1.37
VCPP55072 AL035690.1-201ENST00000490892 383 ntBASIC6.47□□□□□ -1.37
VCPP55072 RN7SL193P-201ENST00000491708 276 ntBASIC6.47□□□□□ -1.37
VCPP55072 NDUFA5P12-201ENST00000503796 343 ntBASIC6.47□□□□□ -1.37
VCPP55072 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.47□□□□□ -1.37
VCPP55072 RNA5SP434-201ENST00000516647 121 ntBASIC6.47□□□□□ -1.37
VCPP55072 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.47□□□□□ -1.37
VCPP55072 AC130365.2-201ENST00000525882 1201 ntBASIC6.47□□□□□ -1.37
VCPP55072 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.47□□□□□ -1.37
VCPP55072 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.47□□□□□ -1.37
VCPP55072 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.47□□□□□ -1.37
VCPP55072 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.47□□□□□ -1.37
VCPP55072 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.47□□□□□ -1.37
VCPP55072 AL583832.1-201ENST00000603227 784 ntBASIC6.47□□□□□ -1.37
VCPP55072 AC027334.1-201ENST00000603257 310 ntBASIC6.47□□□□□ -1.37
VCPP55072 AC024940.4-201ENST00000605507 246 ntBASIC6.47□□□□□ -1.37
VCPP55072 AC116651.1-201ENST00000609724 556 ntBASIC6.47□□□□□ -1.37
VCPP55072 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.47□□□□□ -1.37
VCPP55072 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
VCPP55072 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.47□□□□□ -1.37
VCPP55072 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.47□□□□□ -1.37
VCPP55072 AC092724.1-201ENST00000624623 3397 ntBASIC6.47□□□□□ -1.37
VCPP55072 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.47□□□□□ -1.37
VCPP55072 AC140479.2-201ENST00000421567 3130 ntBASIC6.47□□□□□ -1.37
VCPP55072 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VCPP55072 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.47□□□□□ -1.37
VCPP55072 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.47□□□□□ -1.37
VCPP55072 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
VCPP55072 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
VCPP55072 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
VCPP55072 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
VCPP55072 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
VCPP55072 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
VCPP55072 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
VCPP55072 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.46□□□□□ -1.38
VCPP55072 AC245060.4-201ENST00000413293 1121 ntBASIC6.46□□□□□ -1.38
VCPP55072 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.46□□□□□ -1.38
VCPP55072 AC016027.5-201ENST00000427227 210 ntBASIC6.46□□□□□ -1.38
VCPP55072 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.46□□□□□ -1.38
VCPP55072 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.46□□□□□ -1.38
VCPP55072 MORF4-201ENST00000447135 971 ntBASIC6.46□□□□□ -1.38
VCPP55072 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.46□□□□□ -1.38
VCPP55072 RANP2-201ENST00000456833 229 ntBASIC6.46□□□□□ -1.38
VCPP55072 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.46□□□□□ -1.38
VCPP55072 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.46□□□□□ -1.38
VCPP55072 KHDC1P1-201ENST00000511053 508 ntBASIC6.46□□□□□ -1.38
VCPP55072 RN7SKP67-201ENST00000515905 235 ntBASIC6.46□□□□□ -1.38
VCPP55072 Y_RNA.710-201ENST00000516975 110 ntBASIC6.46□□□□□ -1.38
VCPP55072 AC092865.1-201ENST00000544395 1023 ntBASIC6.46□□□□□ -1.38
VCPP55072 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VCPP55072 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.46□□□□□ -1.38
VCPP55072 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
VCPP55072 AL591167.1-201ENST00000607321 456 ntBASIC6.46□□□□□ -1.38
VCPP55072 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.46□□□□□ -1.38
VCPP55072 AL353684.1-201ENST00000622677 1120 ntBASIC6.46□□□□□ -1.38
VCPP55072 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.46□□□□□ -1.38
VCPP55072 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
VCPP55072 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
VCPP55072 AC007342.5-201ENST00000571340 2142 ntBASIC6.46□□□□□ -1.38
VCPP55072 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VCPP55072 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
VCPP55072 PSG10P-201ENST00000501199 1500 ntBASIC6.45□□□□□ -1.38
VCPP55072 AC027279.1-201ENST00000568885 4284 ntBASIC6.45□□□□□ -1.38
VCPP55072 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
VCPP55072 C4BPAP1-201ENST00000415474 1893 ntBASIC6.45□□□□□ -1.38
VCPP55072 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VCPP55072 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.45□□□□□ -1.38
VCPP55072 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.45□□□□□ -1.38
VCPP55072 RPS2P45-201ENST00000469997 2057 ntBASIC6.45□□□□□ -1.38
VCPP55072 AC106872.5-201ENST00000508856 1416 ntBASIC6.45□□□□□ -1.38
VCPP55072 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VCPP55072 RNA5SP132-201ENST00000364725 118 ntBASIC6.45□□□□□ -1.38
VCPP55072 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
VCPP55072 RNU4-34P-201ENST00000410431 124 ntBASIC6.45□□□□□ -1.38
VCPP55072 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.45□□□□□ -1.38
VCPP55072 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.45□□□□□ -1.38
VCPP55072 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.45□□□□□ -1.38
VCPP55072 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.45□□□□□ -1.38
VCPP55072 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.45□□□□□ -1.38
VCPP55072 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.45□□□□□ -1.38
VCPP55072 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VCPP55072 AL445687.2-201ENST00000458156 728 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms