Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
EPHB3P54753 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.89□□□□□ -1.31
EPHB3P54753 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
EPHB3P54753 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC023245.2-201ENST00000530760 2978 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.89□□□□□ -1.31
EPHB3P54753 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 RPL11P4-201ENST00000332269 436 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 Y_RNA.51-201ENST00000362725 102 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 RN7SKP28-201ENST00000364770 305 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC003045.1-201ENST00000398779 713 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 MIR541-201ENST00000401360 84 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 AL356131.1-201ENST00000405826 414 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 AC096537.2-201ENST00000413707 714 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
EPHB3P54753 MTCO1P21-201ENST00000416634 589 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 AC083862.1-201ENST00000427378 1242 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.89□□□□□ -1.31
EPHB3P54753 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC006326.1-201ENST00000445465 787 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 C1DP3-201ENST00000455013 423 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 RARRES2P3-201ENST00000457739 473 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC095057.1-201ENST00000507583 168 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 MAST4-IT1-201ENST00000514241 658 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 RNU6-964P-201ENST00000516524 69 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.89□□□□□ -1.31
EPHB3P54753 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 AC084121.1-201ENST00000533882 835 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 EIF1P5-201ENST00000585002 234 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
EPHB3P54753 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.89□□□□□ -1.31
EPHB3P54753 AP002802.2-201ENST00000605877 235 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 AC026741.1-201ENST00000605892 482 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC018692.2-201ENST00000624130 348 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
EPHB3P54753 AC104446.1-201ENST00000613728 1321 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 API5P1-201ENST00000424316 1510 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.89□□□□□ -1.31
EPHB3P54753 AL137918.1-201ENST00000624542 1922 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.89□□□□□ -1.31
EPHB3P54753 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
EPHB3P54753 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
EPHB3P54753 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.88□□□□□ -1.31
EPHB3P54753 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.88□□□□□ -1.31
EPHB3P54753 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
EPHB3P54753 AC068733.2-201ENST00000605434 1418 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
EPHB3P54753 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.88□□□□□ -1.31
EPHB3P54753 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
EPHB3P54753 AL391419.1-201ENST00000398901 1275 ntBASIC6.88□□□□□ -1.31
EPHB3P54753 RPL5P20-201ENST00000403848 896 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms