Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDX1P47902 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CDX1P47902 AC245036.1-201ENST00000391727 309 ntBASIC5.09□□□□□ -1.59
CDX1P47902 YWHAZP4-201ENST00000392459 708 ntBASIC5.09□□□□□ -1.59
CDX1P47902 PSMA6P1-201ENST00000400275 741 ntBASIC5.09□□□□□ -1.59
CDX1P47902 PRELID1P1-201ENST00000403549 660 ntBASIC5.09□□□□□ -1.59
CDX1P47902 RNU2-18P-201ENST00000411224 162 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AL359885.1-201ENST00000415786 903 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.09□□□□□ -1.59
CDX1P47902 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDX1P47902 AC093084.1-201ENST00000424233 687 ntBASIC5.09□□□□□ -1.59
CDX1P47902 MTND4LP13-201ENST00000425022 298 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.09□□□□□ -1.59
CDX1P47902 Z68868.1-201ENST00000429048 544 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.09□□□□□ -1.59
CDX1P47902 AC009237.1-201ENST00000442127 744 ntBASIC5.09□□□□□ -1.59
CDX1P47902 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.09□□□□□ -1.59
CDX1P47902 NPM1P19-201ENST00000450070 712 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDX1P47902 TAAR4P-201ENST00000454843 1039 ntBASIC5.09□□□□□ -1.59
CDX1P47902 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.09□□□□□ -1.59
CDX1P47902 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.09□□□□□ -1.59
CDX1P47902 LARP7P4-201ENST00000481075 878 ntBASIC5.09□□□□□ -1.59
CDX1P47902 RPL29P23-201ENST00000486188 442 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC090543.1-201ENST00000492168 485 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.09□□□□□ -1.59
CDX1P47902 IGHV3-57-201ENST00000520143 280 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC116917.1-201ENST00000520558 305 ntBASIC5.09□□□□□ -1.59
CDX1P47902 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CDX1P47902 OR4A41P-201ENST00000533053 928 ntBASIC5.09□□□□□ -1.59
CDX1P47902 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CDX1P47902 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.09□□□□□ -1.59
CDX1P47902 AC121758.1-202ENST00000556917 658 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.09□□□□□ -1.59
CDX1P47902 AL731537.2-201ENST00000561565 951 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.09□□□□□ -1.59
CDX1P47902 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.09□□□□□ -1.59
CDX1P47902 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.09□□□□□ -1.59
CDX1P47902 AC004805.3-201ENST00000603178 310 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AL451049.1-201ENST00000608672 497 ntBASIC5.09□□□□□ -1.59
CDX1P47902 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.09□□□□□ -1.59
CDX1P47902 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.09□□□□□ -1.59
CDX1P47902 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.09□□□□□ -1.59
CDX1P47902 AC114546.4-201ENST00000624413 369 ntBASIC5.09□□□□□ -1.59
CDX1P47902 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.09□□□□□ -1.59
CDX1P47902 AL596275.2-207ENST00000641188 675 ntBASIC5.09□□□□□ -1.59
CDX1P47902 BCORP1-203ENST00000513194 5093 ntBASIC5.09□□□□□ -1.59
CDX1P47902 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.09□□□□□ -1.59
CDX1P47902 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.09□□□□□ -1.59
CDX1P47902 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.09□□□□□ -1.59
CDX1P47902 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.09□□□□□ -1.6
CDX1P47902 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDX1P47902 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDX1P47902 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDX1P47902 SHQ1P1-201ENST00000437111 1544 ntBASIC5.08□□□□□ -1.6
CDX1P47902 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.08□□□□□ -1.6
CDX1P47902 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDX1P47902 AC107021.2-201ENST00000567714 2095 ntBASIC5.08□□□□□ -1.6
CDX1P47902 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDX1P47902 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.08□□□□□ -1.6
CDX1P47902 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDX1P47902 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDX1P47902 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDX1P47902 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CDX1P47902 RNU4-39P-201ENST00000362455 127 ntBASIC5.08□□□□□ -1.6
CDX1P47902 RNU1-84P-201ENST00000365447 164 ntBASIC5.08□□□□□ -1.6
CDX1P47902 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.08□□□□□ -1.6
CDX1P47902 RNA5SP187-201ENST00000384400 119 ntBASIC5.08□□□□□ -1.6
CDX1P47902 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDX1P47902 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDX1P47902 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.08□□□□□ -1.6
CDX1P47902 HMGN2P27-201ENST00000427352 270 ntBASIC5.08□□□□□ -1.6
CDX1P47902 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDX1P47902 LINC00328-2P-201ENST00000436585 219 ntBASIC5.08□□□□□ -1.6
CDX1P47902 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.08□□□□□ -1.6
CDX1P47902 Z99127.2-201ENST00000441426 334 ntBASIC5.08□□□□□ -1.6
CDX1P47902 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.08□□□□□ -1.6
CDX1P47902 AL445687.2-201ENST00000458156 728 ntBASIC5.08□□□□□ -1.6
CDX1P47902 RPL23AP68-201ENST00000480924 445 ntBASIC5.08□□□□□ -1.6
CDX1P47902 RPS27P20-201ENST00000492051 246 ntBASIC5.08□□□□□ -1.6
CDX1P47902 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDX1P47902 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CDX1P47902 AC108157.1-201ENST00000510511 539 ntBASIC5.08□□□□□ -1.6
CDX1P47902 ASNSP4-201ENST00000511103 447 ntBASIC5.08□□□□□ -1.6
CDX1P47902 SNORA74.1-201ENST00000516320 180 ntBASIC5.08□□□□□ -1.6
CDX1P47902 RNU6-889P-201ENST00000517189 103 ntBASIC5.08□□□□□ -1.6
CDX1P47902 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDX1P47902 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
CDX1P47902 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.08□□□□□ -1.6
CDX1P47902 AC009852.2-201ENST00000567898 485 ntBASIC5.08□□□□□ -1.6
CDX1P47902 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDX1P47902 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.08□□□□□ -1.6
CDX1P47902 AL133247.2-201ENST00000603236 482 ntBASIC5.08□□□□□ -1.6
CDX1P47902 AL356986.1-201ENST00000604085 341 ntBASIC5.08□□□□□ -1.6
CDX1P47902 AC012368.3-201ENST00000604190 219 ntBASIC5.08□□□□□ -1.6
CDX1P47902 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.08□□□□□ -1.6
CDX1P47902 AL359091.2-201ENST00000609303 556 ntBASIC5.08□□□□□ -1.6
CDX1P47902 WBP1LP8-201ENST00000617401 327 ntBASIC5.08□□□□□ -1.6
CDX1P47902 MIR6085-201ENST00000618314 110 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms