Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 RNA5SP438-201ENST00000516561 112 ntBASIC5.76□□□□□ -1.49
SHMT2P34897 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.76□□□□□ -1.49
SHMT2P34897 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.76□□□□□ -1.49
SHMT2P34897 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.76□□□□□ -1.49
SHMT2P34897 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.76□□□□□ -1.49
SHMT2P34897 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.76□□□□□ -1.49
SHMT2P34897 AC090888.3-201ENST00000558917 509 ntBASIC5.76□□□□□ -1.49
SHMT2P34897 AC023389.2-201ENST00000580031 955 ntBASIC5.76□□□□□ -1.49
SHMT2P34897 AL139099.4-201ENST00000614802 114 ntBASIC5.76□□□□□ -1.49
SHMT2P34897 MIR6861-201ENST00000618657 64 ntBASIC5.76□□□□□ -1.49
SHMT2P34897 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.76□□□□□ -1.49
SHMT2P34897 AC129915.3-201ENST00000634128 948 ntBASIC5.76□□□□□ -1.49
SHMT2P34897 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.76□□□□□ -1.49
SHMT2P34897 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.76□□□□□ -1.49
SHMT2P34897 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SHMT2P34897 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SHMT2P34897 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHMT2P34897 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 AC109446.4-201ENST00000623235 2755 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 AC027279.4-201ENST00000624371 2072 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SHMT2P34897 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.75□□□□□ -1.49
SHMT2P34897 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SHMT2P34897 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 RPS4XP5-201ENST00000419038 768 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 NPM1P25-201ENST00000429734 854 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 NDUFS5P5-201ENST00000437256 321 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.75□□□□□ -1.49
SHMT2P34897 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SHMT2P34897 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.75□□□□□ -1.49
SHMT2P34897 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 HLA-DPA3-207ENST00000454398 229 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.75□□□□□ -1.49
SHMT2P34897 SNRPCP3-201ENST00000474888 476 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 GAPDHP71-201ENST00000511530 1003 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 RNA5SP271-201ENST00000516700 88 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.75□□□□□ -1.49
SHMT2P34897 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 PCNAP4-201ENST00000532690 730 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.75□□□□□ -1.49
SHMT2P34897 AL049779.3-201ENST00000557141 606 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 NPM1P5-201ENST00000557228 838 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.75□□□□□ -1.49
SHMT2P34897 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.75□□□□□ -1.49
SHMT2P34897 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.75□□□□□ -1.49
SHMT2P34897 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.75□□□□□ -1.49
SHMT2P34897 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.75□□□□□ -1.49
SHMT2P34897 AL445670.1-201ENST00000618889 801 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 MAPK10-350ENST00000641777 965 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 PARP4P2-201ENST00000446672 3326 ntBASIC5.75□□□□□ -1.49
SHMT2P34897 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SHMT2P34897 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHMT2P34897 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SHMT2P34897 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.75□□□□□ -1.49
SHMT2P34897 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SHMT2P34897 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHMT2P34897 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHMT2P34897 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.74□□□□□ -1.49
SHMT2P34897 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SHMT2P34897 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHMT2P34897 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHMT2P34897 AC005261.2-201ENST00000593427 4258 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 OR7E25P-201ENST00000344844 931 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 RN7SKP77-201ENST00000363261 353 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.74□□□□□ -1.49
SHMT2P34897 AL035660.1-201ENST00000422041 222 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.74□□□□□ -1.49
SHMT2P34897 KRT8P51-201ENST00000438938 274 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.74□□□□□ -1.49
SHMT2P34897 AL663074.2-201ENST00000440621 479 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.74□□□□□ -1.49
SHMT2P34897 OSTCP1-201ENST00000455507 450 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 AC099521.1-201ENST00000482557 334 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.74□□□□□ -1.49
SHMT2P34897 OR7E158P-201ENST00000524483 910 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.74□□□□□ -1.49
SHMT2P34897 AC244502.2-201ENST00000543361 851 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 NANOGNBP2-201ENST00000544753 553 ntBASIC5.74□□□□□ -1.49
SHMT2P34897 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms