Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC6A4P31645 RNU6-1331P-201ENST00000363658 106 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SLC6A4P31645 RNA5SP122-201ENST00000384457 108 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 SNORA77.2-201ENST00000408571 112 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 RN7SKP144-201ENST00000411108 279 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC6A4P31645 HMGB3P5-201ENST00000428894 612 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC6A4P31645 EIF5AP4-201ENST00000441206 465 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC6A4P31645 RPS26P41-201ENST00000450370 284 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 PPIAP7-201ENST00000454070 489 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC6A4P31645 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC6A4P31645 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SLC6A4P31645 Y_RNA.717-201ENST00000517106 92 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 MTND2P38-201ENST00000522536 667 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 AP000620.1-201ENST00000527147 504 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SLC6A4P31645 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC139697.1-201ENST00000548429 745 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC002310.3-201ENST00000569728 723 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 AC010547.7-201ENST00000570323 333 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 MIR3189-201ENST00000578735 73 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.42□□□□□ -1.38
SLC6A4P31645 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.42□□□□□ -1.38
SLC6A4P31645 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC023762.1-201ENST00000603280 584 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 RN7SL261P-201ENST00000613441 282 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 MIR8084-201ENST00000614105 89 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 RFPL4AP6-201ENST00000616792 846 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC007275.1-201ENST00000621243 671 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.42□□□□□ -1.38
SLC6A4P31645 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC6A4P31645 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC6A4P31645 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SLC6A4P31645 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SLC6A4P31645 WBP11P1-201ENST00000562560 1931 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SLC6A4P31645 AL354854.1-201ENST00000455940 1363 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SLC6A4P31645 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.42□□□□□ -1.38
SLC6A4P31645 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 AC011815.2-201ENST00000618230 2021 ntBASIC6.42□□□□□ -1.38
SLC6A4P31645 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.42□□□□□ -1.38
SLC6A4P31645 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SLC6A4P31645 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC6A4P31645 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC6A4P31645 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.41□□□□□ -1.38
SLC6A4P31645 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SLC6A4P31645 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SLC6A4P31645 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.41□□□□□ -1.38
SLC6A4P31645 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 SNORA51.9-201ENST00000384295 124 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 MIR433-201ENST00000384837 93 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.41□□□□□ -1.38
SLC6A4P31645 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SLC6A4P31645 IGLV3-4-201ENST00000432300 244 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 AL606490.7-201ENST00000433136 191 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 AC242426.1-201ENST00000435270 960 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 AMYP1-201ENST00000440059 1023 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 Z99127.2-201ENST00000441426 334 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 AC016908.1-201ENST00000442571 1219 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 STRADBP1-201ENST00000478954 1281 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.41□□□□□ -1.38
SLC6A4P31645 RBBP4P1-201ENST00000502424 1276 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SLC6A4P31645 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SLC6A4P31645 RNU5A-7P-201ENST00000515979 116 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 IGHV1-14-201ENST00000523391 241 ntBASIC6.41□□□□□ -1.38
SLC6A4P31645 SOX5P1-201ENST00000524155 1127 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms