Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
CLIP1P30622 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
CLIP1P30622 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CLIP1P30622 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
CLIP1P30622 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
CLIP1P30622 AL117378.2-201ENST00000622916 1337 ntBASIC9.09□□□□□ -0.95
CLIP1P30622 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
CLIP1P30622 RPL23AP17-201ENST00000401064 499 ntBASIC9.09□□□□□ -0.95
CLIP1P30622 RPS6P23-201ENST00000413224 722 ntBASIC9.09□□□□□ -0.95
CLIP1P30622 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC9.09□□□□□ -0.95
CLIP1P30622 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC9.09□□□□□ -0.95
CLIP1P30622 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC9.09□□□□□ -0.95
CLIP1P30622 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC9.09□□□□□ -0.95
CLIP1P30622 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC9.09□□□□□ -0.95
CLIP1P30622 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC9.09□□□□□ -0.95
CLIP1P30622 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC9.09□□□□□ -0.95
CLIP1P30622 BNIP3P32-201ENST00000600015 554 ntBASIC9.09□□□□□ -0.95
CLIP1P30622 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC9.09□□□□□ -0.95
CLIP1P30622 AL390318.1-201ENST00000624564 687 ntBASIC9.09□□□□□ -0.95
CLIP1P30622 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC9.09□□□□□ -0.95
CLIP1P30622 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC9.09□□□□□ -0.95
CLIP1P30622 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
CLIP1P30622 AP002991.2-201ENST00000623807 2801 ntBASIC9.09□□□□□ -0.95
CLIP1P30622 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC9.09□□□□□ -0.95
CLIP1P30622 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC9.08□□□□□ -0.96
CLIP1P30622 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC9.08□□□□□ -0.96
CLIP1P30622 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CLIP1P30622 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CLIP1P30622 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
CLIP1P30622 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CLIP1P30622 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC9.08□□□□□ -0.96
CLIP1P30622 RN7SKP279-201ENST00000411383 298 ntBASIC9.08□□□□□ -0.96
CLIP1P30622 AL390879.1-201ENST00000439143 386 ntBASIC9.08□□□□□ -0.96
CLIP1P30622 AC087672.1-201ENST00000479876 766 ntBASIC9.08□□□□□ -0.96
CLIP1P30622 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC9.08□□□□□ -0.96
CLIP1P30622 RN7SL727P-201ENST00000482164 296 ntBASIC9.08□□□□□ -0.96
CLIP1P30622 RN7SL184P-201ENST00000488308 297 ntBASIC9.08□□□□□ -0.96
CLIP1P30622 IGLV3-24-201ENST00000517477 197 ntBASIC9.08□□□□□ -0.96
CLIP1P30622 AL163952.1-202ENST00000569625 600 ntBASIC9.08□□□□□ -0.96
CLIP1P30622 CASC22-201ENST00000569713 386 ntTSL 5 BASIC9.08□□□□□ -0.96
CLIP1P30622 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC9.08□□□□□ -0.96
CLIP1P30622 AC007204.2-201ENST00000615022 616 ntBASIC9.08□□□□□ -0.96
CLIP1P30622 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC9.08□□□□□ -0.96
CLIP1P30622 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CLIP1P30622 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC9.08□□□□□ -0.96
CLIP1P30622 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC9.08□□□□□ -0.96
CLIP1P30622 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
CLIP1P30622 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CLIP1P30622 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
CLIP1P30622 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
CLIP1P30622 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC9.08□□□□□ -0.96
CLIP1P30622 AC109780.1-201ENST00000451768 1344 ntBASIC9.07□□□□□ -0.96
CLIP1P30622 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CLIP1P30622 AP000534.2-201ENST00000412729 568 ntBASIC9.07□□□□□ -0.96
CLIP1P30622 AL133173.1-201ENST00000423458 397 ntBASIC9.07□□□□□ -0.96
CLIP1P30622 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC9.07□□□□□ -0.96
CLIP1P30622 AC079080.1-201ENST00000479841 822 ntBASIC9.07□□□□□ -0.96
CLIP1P30622 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC9.07□□□□□ -0.96
CLIP1P30622 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC9.07□□□□□ -0.96
CLIP1P30622 AC002456.2-201ENST00000509356 380 ntBASIC9.07□□□□□ -0.96
CLIP1P30622 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC9.07□□□□□ -0.96
CLIP1P30622 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC9.07□□□□□ -0.96
CLIP1P30622 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC9.07□□□□□ -0.96
CLIP1P30622 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC9.07□□□□□ -0.96
CLIP1P30622 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC9.07□□□□□ -0.96
CLIP1P30622 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
CLIP1P30622 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC9.07□□□□□ -0.96
CLIP1P30622 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CLIP1P30622 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC9.07□□□□□ -0.96
CLIP1P30622 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
CLIP1P30622 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CLIP1P30622 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CLIP1P30622 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
CLIP1P30622 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
CLIP1P30622 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
CLIP1P30622 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CLIP1P30622 RNU4-34P-201ENST00000410431 124 ntBASIC9.06□□□□□ -0.96
CLIP1P30622 RMRPP5-201ENST00000411156 267 ntBASIC9.06□□□□□ -0.96
CLIP1P30622 EIF4A1P7-201ENST00000421800 1220 ntBASIC9.06□□□□□ -0.96
CLIP1P30622 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC9.06□□□□□ -0.96
CLIP1P30622 CFL1P1-202ENST00000432948 411 ntBASIC9.06□□□□□ -0.96
CLIP1P30622 RSU1P1-201ENST00000453416 441 ntBASIC9.06□□□□□ -0.96
CLIP1P30622 SBDSP1-204ENST00000453858 737 ntBASIC9.06□□□□□ -0.96
CLIP1P30622 AP000547.1-201ENST00000454360 617 ntBASIC9.06□□□□□ -0.96
CLIP1P30622 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC9.06□□□□□ -0.96
CLIP1P30622 snoU109.5-201ENST00000516231 132 ntBASIC9.06□□□□□ -0.96
CLIP1P30622 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC9.06□□□□□ -0.96
CLIP1P30622 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC9.06□□□□□ -0.96
CLIP1P30622 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CLIP1P30622 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CLIP1P30622 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC9.06□□□□□ -0.96
CLIP1P30622 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CLIP1P30622 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC9.06□□□□□ -0.96
CLIP1P30622 AC053481.2-202ENST00000582394 1500 ntBASIC9.06□□□□□ -0.96
CLIP1P30622 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC9.06□□□□□ -0.96
CLIP1P30622 PABPC1P6-201ENST00000445594 1829 ntBASIC9.06□□□□□ -0.96
CLIP1P30622 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CLIP1P30622 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CLIP1P30622 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CLIP1P30622 GAPDHP24-201ENST00000328713 983 ntBASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms