Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC245052.7-201ENST00000601161 359 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 BX323046.1-201ENST00000610145 535 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AL360219.1-201ENST00000610230 366 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC087241.4-201ENST00000612441 480 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 VN1R74P-201ENST00000613259 503 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC015722.2-201ENST00000622210 551 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 PHF2P2-202ENST00000444553 2865 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 LRRC37A15P-201ENST00000514785 1355 ntBASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
CSB-PGBD3P0DP91 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AL096816.1-201ENST00000623300 2920 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 RNU6-1320P-201ENST00000390838 107 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 RNU6-1269P-201ENST00000391139 107 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AL773545.3-201ENST00000414297 706 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 P2RY10P2-201ENST00000416730 913 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 MORF4L1P5-201ENST00000433352 961 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 RPS27P5-201ENST00000444247 244 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 ATG12P2-201ENST00000456830 416 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 RNU6-599P-201ENST00000459383 107 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 RNU6-1193P-201ENST00000459461 107 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 CREM-220ENST00000463314 964 ntTSL 2 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC135721.2-201ENST00000464237 300 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC018992.1-201ENST00000523778 2149 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC095057.3-201ENST00000567102 1157 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 MIR4719-201ENST00000585233 84 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AP003465.2-201ENST00000602571 373 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 PART1_2.1-201ENST00000612397 250 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 U6.42-201ENST00000618440 107 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC022079.2-201ENST00000619739 566 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 RNU6-368P-201ENST00000620928 107 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 RNU6-538P-201ENST00000622329 107 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 Z83820.1-201ENST00000456978 1499 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC011503.2-201ENST00000594230 1500 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC073544.1-201ENST00000600110 1595 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC007382.1-201ENST00000624376 2618 ntBASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
CSB-PGBD3P0DP91 AC124045.1-201ENST00000606008 1953 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 TATDN2P3-201ENST00000452855 3665 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 OR2AH1P-202ENST00000641232 2744 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 AC007938.1-201ENST00000562524 2902 ntBASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CSB-PGBD3P0DP91 MTHFD2P5-201ENST00000320415 844 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms