Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC114878.1-201ENST00000441166 358 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-DOAP06340 RN7SL717P-201ENST00000478343 297 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 AC099521.1-201ENST00000482557 334 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 CCDC11P1-201ENST00000503137 1162 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 AC010460.2-201ENST00000509054 677 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 CCNHP1-201ENST00000513311 678 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 CYCSP22-201ENST00000517555 339 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 TMEM97P2-201ENST00000517841 403 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 HMGN2P36-201ENST00000529541 409 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 OR4A42P-201ENST00000531397 938 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 MKKS-203ENST00000609375 882 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 AP000894.4-201ENST00000610185 483 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 MIR6768-201ENST00000610734 72 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 AL352984.2-201ENST00000611153 546 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 uc_338.26-201ENST00000612659 160 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 AL139099.4-201ENST00000614802 114 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 AC004836.1-201ENST00000623032 634 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-DOAP06340 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-DOAP06340 AL662795.2-201ENST00000624252 3706 ntBASIC7.05□□□□□ -1.28
HLA-DOAP06340 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HLA-DOAP06340 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.05□□□□□ -1.28
HLA-DOAP06340 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 Z93929.1-201ENST00000418200 1475 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC007562.1-201ENST00000421819 517 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC007568.1-201ENST00000422912 471 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 MTCYBP15-201ENST00000433123 1127 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC023274.2-201ENST00000445264 521 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 NENFP3-201ENST00000503735 313 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 RNU4-18P-201ENST00000516751 149 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AC242628.1-201ENST00000606810 391 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 RN7SL787P-201ENST00000613000 284 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 MIR193BHG-214ENST00000641765 509 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 MTCO1P11-201ENST00000429111 1528 ntBASIC7.04□□□□□ -1.28
HLA-DOAP06340 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
HLA-DOAP06340 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HLA-DOAP06340 AL591135.1-201ENST00000401578 5914 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC008957.3-201ENST00000624112 2242 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 AL391262.1-201ENST00000556558 1992 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 FUNDC2P3-201ENST00000334716 533 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 RNA5SP242-201ENST00000364171 118 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms