Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC023818.1-201ENST00000498379 384 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 RN7SKP253-201ENST00000516424 309 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A1P02462 EIF4A2P5-201ENST00000529914 499 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.81□□□□□ -1.32
COL4A1P02462 AGGF1P7-201ENST00000562369 913 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 AC116651.1-201ENST00000609724 556 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 AC090527.3-201ENST00000619041 548 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC6.81□□□□□ -1.32
COL4A1P02462 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
COL4A1P02462 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A1P02462 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A1P02462 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A1P02462 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.81□□□□□ -1.32
COL4A1P02462 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A1P02462 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.81□□□□□ -1.32
COL4A1P02462 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
COL4A1P02462 AL031595.3-201ENST00000624919 14262 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
COL4A1P02462 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A1P02462 RPS26P13-201ENST00000419030 330 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A1P02462 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.81□□□□□ -1.32
COL4A1P02462 RN7SL610P-201ENST00000463845 291 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 RN7SL51P-201ENST00000468230 285 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A1P02462 AC090114.3-201ENST00000479267 829 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 AC004453.1-201ENST00000487895 408 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.81□□□□□ -1.32
COL4A1P02462 AC105420.1-201ENST00000504389 582 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.81□□□□□ -1.32
COL4A1P02462 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
COL4A1P02462 AP005403.1-201ENST00000579720 229 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.81□□□□□ -1.32
COL4A1P02462 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.81□□□□□ -1.32
COL4A1P02462 AC069307.1-201ENST00000602820 447 ntBASIC6.81□□□□□ -1.32
COL4A1P02462 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.81□□□□□ -1.32
COL4A1P02462 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.81□□□□□ -1.32
COL4A1P02462 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A1P02462 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A1P02462 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.8□□□□□ -1.32
COL4A1P02462 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.8□□□□□ -1.32
COL4A1P02462 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COL4A1P02462 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A1P02462 AL359195.2-201ENST00000623657 4412 ntBASIC6.8□□□□□ -1.32
COL4A1P02462 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A1P02462 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A1P02462 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A1P02462 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A1P02462 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A1P02462 AL589647.1-201ENST00000402485 466 ntBASIC6.8□□□□□ -1.32
COL4A1P02462 AL133325.1-201ENST00000421090 382 ntBASIC6.8□□□□□ -1.32
COL4A1P02462 AC092651.1-201ENST00000426110 312 ntBASIC6.8□□□□□ -1.32
COL4A1P02462 RHOT1P3-201ENST00000436571 331 ntBASIC6.8□□□□□ -1.32
COL4A1P02462 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.8□□□□□ -1.32
COL4A1P02462 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.8□□□□□ -1.32
COL4A1P02462 AC004825.1-201ENST00000555068 586 ntBASIC6.8□□□□□ -1.32
COL4A1P02462 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.8□□□□□ -1.32
COL4A1P02462 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.8□□□□□ -1.32
COL4A1P02462 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.8□□□□□ -1.32
COL4A1P02462 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A1P02462 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A1P02462 AC023421.1-201ENST00000590535 1785 ntBASIC6.8□□□□□ -1.32
COL4A1P02462 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A1P02462 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC6.8□□□□□ -1.32
COL4A1P02462 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COL4A1P02462 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COL4A1P02462 AC016251.2-201ENST00000623393 3089 ntBASIC6.8□□□□□ -1.32
COL4A1P02462 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
COL4A1P02462 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A1P02462 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A1P02462 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A1P02462 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A1P02462 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A1P02462 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.79□□□□□ -1.32
COL4A1P02462 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A1P02462 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A1P02462 AC073429.2-201ENST00000569694 1444 ntBASIC6.79□□□□□ -1.32
COL4A1P02462 SNORA70H-201ENST00000383910 135 ntBASIC6.79□□□□□ -1.32
COL4A1P02462 SNORA70J-201ENST00000384182 135 ntBASIC6.79□□□□□ -1.32
COL4A1P02462 AC096921.1-201ENST00000411661 375 ntBASIC6.79□□□□□ -1.32
COL4A1P02462 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A1P02462 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.79□□□□□ -1.32
COL4A1P02462 RPL15P21-201ENST00000495592 567 ntBASIC6.79□□□□□ -1.32
COL4A1P02462 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A1P02462 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.79□□□□□ -1.32
COL4A1P02462 AL049779.2-201ENST00000553847 315 ntBASIC6.79□□□□□ -1.32
COL4A1P02462 SETP3-201ENST00000581726 813 ntBASIC6.79□□□□□ -1.32
COL4A1P02462 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A1P02462 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A1P02462 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
COL4A1P02462 AC007938.2-201ENST00000604666 2634 ntBASIC6.79□□□□□ -1.32
COL4A1P02462 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A1P02462 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL4A1P02462 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A1P02462 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A1P02462 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A1P02462 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A1P02462 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.78□□□□□ -1.32
COL4A1P02462 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms