Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.68□□□□□ -1.5
TNFP01375 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNFP01375 AC114876.1-201ENST00000490962 1366 ntBASIC5.68□□□□□ -1.5
TNFP01375 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNFP01375 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNFP01375 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNFP01375 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNFP01375 U3.25-201ENST00000391209 220 ntBASIC5.68□□□□□ -1.5
TNFP01375 OR2W4P-201ENST00000406496 926 ntBASIC5.68□□□□□ -1.5
TNFP01375 AL357752.1-201ENST00000412817 349 ntBASIC5.68□□□□□ -1.5
TNFP01375 RPS21P8-201ENST00000413365 247 ntBASIC5.68□□□□□ -1.5
TNFP01375 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.68□□□□□ -1.5
TNFP01375 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.68□□□□□ -1.5
TNFP01375 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.68□□□□□ -1.5
TNFP01375 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.68□□□□□ -1.5
TNFP01375 AC073909.1-201ENST00000447112 999 ntBASIC5.68□□□□□ -1.5
TNFP01375 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.68□□□□□ -1.5
TNFP01375 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.68□□□□□ -1.5
TNFP01375 AL445687.2-201ENST00000458156 728 ntBASIC5.68□□□□□ -1.5
TNFP01375 AC074386.1-201ENST00000476560 767 ntBASIC5.68□□□□□ -1.5
TNFP01375 AC087672.1-201ENST00000479876 766 ntBASIC5.68□□□□□ -1.5
TNFP01375 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
TNFP01375 RPL38P3-201ENST00000484463 213 ntBASIC5.68□□□□□ -1.5
TNFP01375 RN7SL214P-201ENST00000487317 265 ntBASIC5.68□□□□□ -1.5
TNFP01375 AC009120.1-201ENST00000493458 473 ntBASIC5.68□□□□□ -1.5
TNFP01375 RN7SL466P-201ENST00000497546 295 ntBASIC5.68□□□□□ -1.5
TNFP01375 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.68□□□□□ -1.5
TNFP01375 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.68□□□□□ -1.5
TNFP01375 AC074255.1-201ENST00000511259 501 ntBASIC5.68□□□□□ -1.5
TNFP01375 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.68□□□□□ -1.5
TNFP01375 SNORA81.2-201ENST00000516868 170 ntBASIC5.68□□□□□ -1.5
TNFP01375 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.68□□□□□ -1.5
TNFP01375 AC007225.2-201ENST00000562529 256 ntBASIC5.68□□□□□ -1.5
TNFP01375 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.68□□□□□ -1.5
TNFP01375 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.68□□□□□ -1.5
TNFP01375 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.68□□□□□ -1.5
TNFP01375 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.68□□□□□ -1.5
TNFP01375 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.68□□□□□ -1.5
TNFP01375 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.68□□□□□ -1.5
TNFP01375 AC007683.2-201ENST00000624681 714 ntBASIC5.68□□□□□ -1.5
TNFP01375 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.68□□□□□ -1.5
TNFP01375 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNFP01375 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.68□□□□□ -1.5
TNFP01375 AC117409.1-201ENST00000470499 1310 ntBASIC5.68□□□□□ -1.5
TNFP01375 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.68□□□□□ -1.5
TNFP01375 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TNFP01375 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNFP01375 AL034546.1-201ENST00000623740 3693 ntBASIC5.68□□□□□ -1.5
TNFP01375 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TNFP01375 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 AC130360.2-201ENST00000533477 1556 ntBASIC5.67□□□□□ -1.5
TNFP01375 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.67□□□□□ -1.5
TNFP01375 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
TNFP01375 AP004607.3-201ENST00000530354 3915 ntBASIC5.67□□□□□ -1.5
TNFP01375 AC027279.4-201ENST00000624371 2072 ntBASIC5.67□□□□□ -1.5
TNFP01375 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 AL159987.1-201ENST00000347911 293 ntBASIC5.67□□□□□ -1.5
TNFP01375 SNORA64.1-201ENST00000362600 132 ntBASIC5.67□□□□□ -1.5
TNFP01375 AL121835.1-201ENST00000404250 354 ntBASIC5.67□□□□□ -1.5
TNFP01375 OR3A2-201ENST00000408891 1076 ntBASIC5.67□□□□□ -1.5
TNFP01375 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.67□□□□□ -1.5
TNFP01375 TNPO1P1-201ENST00000423641 1138 ntBASIC5.67□□□□□ -1.5
TNFP01375 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.67□□□□□ -1.5
TNFP01375 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.67□□□□□ -1.5
TNFP01375 AL450996.1-201ENST00000445574 1202 ntBASIC5.67□□□□□ -1.5
TNFP01375 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.67□□□□□ -1.5
TNFP01375 RN7SL570P-201ENST00000484405 292 ntBASIC5.67□□□□□ -1.5
TNFP01375 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 ABCA11P-202ENST00000504019 2110 ntBASIC5.67□□□□□ -1.5
TNFP01375 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.67□□□□□ -1.5
TNFP01375 AC139365.2-201ENST00000517972 253 ntBASIC5.67□□□□□ -1.5
TNFP01375 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.67□□□□□ -1.5
TNFP01375 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.67□□□□□ -1.5
TNFP01375 AL049779.3-201ENST00000557141 606 ntBASIC5.67□□□□□ -1.5
TNFP01375 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 DPPA2P4-201ENST00000563717 878 ntBASIC5.67□□□□□ -1.5
TNFP01375 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.67□□□□□ -1.5
TNFP01375 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.67□□□□□ -1.5
TNFP01375 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.67□□□□□ -1.5
TNFP01375 AC022467.1-201ENST00000614738 749 ntBASIC5.67□□□□□ -1.5
TNFP01375 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.67□□□□□ -1.5
TNFP01375 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.67□□□□□ -1.5
TNFP01375 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
TNFP01375 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 IMMTP1-201ENST00000435590 2219 ntBASIC5.67□□□□□ -1.5
TNFP01375 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TNFP01375 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TNFP01375 YES1P1-201ENST00000418510 1628 ntBASIC5.66□□□□□ -1.5
TNFP01375 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TNFP01375 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.66□□□□□ -1.5
TNFP01375 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms