Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.6□□□□□ -1.51
NKX2-2O95096 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 RBMY1HP-201ENST00000382759 1389 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 AL512283.1-201ENST00000606756 1384 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.6□□□□□ -1.51
NKX2-2O95096 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 RN7SKP171-201ENST00000364417 303 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 SNORD51.1-201ENST00000365405 77 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 RNA5SP279-201ENST00000365513 117 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 MYL6P5-201ENST00000412707 459 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 RPS26P38-201ENST00000414476 348 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 GLUD1P9-201ENST00000420997 1173 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 AC023141.3-201ENST00000436698 278 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 CUBNP2-201ENST00000443534 1139 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 TIMM8BP2-201ENST00000445940 251 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 FTLP8-201ENST00000446770 267 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 AC002075.1-201ENST00000457396 676 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.6□□□□□ -1.51
NKX2-2O95096 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.6□□□□□ -1.51
NKX2-2O95096 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.6□□□□□ -1.51
NKX2-2O95096 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.6□□□□□ -1.51
NKX2-2O95096 AP001496.3-201ENST00000580230 913 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 AC005726.4-201ENST00000582858 458 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.6□□□□□ -1.51
NKX2-2O95096 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.6□□□□□ -1.51
NKX2-2O95096 AL671309.1-201ENST00000603750 544 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 AC135803.1-201ENST00000608748 565 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 AL136097.3-201ENST00000611097 505 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 AL512506.1-201ENST00000613918 449 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 FAM27E2-201ENST00000619668 403 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 AL133370.2-201ENST00000619934 439 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 AC069234.4-201ENST00000621276 412 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 AL357562.1-201ENST00000624911 609 ntBASIC5.6□□□□□ -1.51
NKX2-2O95096 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.6□□□□□ -1.51
NKX2-2O95096 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
NKX2-2O95096 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX2-2O95096 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NKX2-2O95096 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX2-2O95096 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AL731532.1-201ENST00000623972 4236 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NKX2-2O95096 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC090181.3-201ENST00000624777 1514 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NKX2-2O95096 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 OR52B5P-204ENST00000641744 3467 ntBASIC5.59□□□□□ -1.51
NKX2-2O95096 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX2-2O95096 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
NKX2-2O95096 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX2-2O95096 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX2-2O95096 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms