Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM1O00151 AL591135.1-201ENST00000401578 5914 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 RBPJP7-201ENST00000442803 1447 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 RBPJP5-201ENST00000449433 1447 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
PDLIM1O00151 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
PDLIM1O00151 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM1O00151 AL359091.1-201ENST00000449048 1734 ntBASIC5.71□□□□□ -1.5
PDLIM1O00151 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PDLIM1O00151 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PDLIM1O00151 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM1O00151 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
PDLIM1O00151 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM1O00151 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PDLIM1O00151 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 SNORA43.1-201ENST00000364863 140 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.7□□□□□ -1.5
PDLIM1O00151 METTL15P3-201ENST00000415522 1221 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 RPL21P50-201ENST00000417698 477 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 RANP7-201ENST00000418085 644 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 AL360013.1-201ENST00000419031 858 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM1O00151 NMD3P2-201ENST00000421815 761 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM1O00151 AC234771.2-201ENST00000445718 597 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PDLIM1O00151 AC124945.1-201ENST00000485133 188 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 RN7SL714P-201ENST00000487050 298 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 RN7SL568P-201ENST00000493069 298 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM1O00151 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM1O00151 GUSBP9-201ENST00000510138 584 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM1O00151 EIF4EP5-201ENST00000528228 640 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM1O00151 AC009729.1-201ENST00000548873 1133 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM1O00151 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM1O00151 MT1CP-201ENST00000567054 174 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.7□□□□□ -1.5
PDLIM1O00151 AC005332.4-201ENST00000592752 579 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 AL589765.6-201ENST00000601909 549 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 AC011500.1-201ENST00000601963 469 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 AC015712.7-201ENST00000615211 635 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM1O00151 AL137067.2-201ENST00000621202 131 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 SAMMSON-227ENST00000642114 1199 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 AL158152.1-201ENST00000602652 1435 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 AC024587.1-201ENST00000505925 2157 ntBASIC5.7□□□□□ -1.5
PDLIM1O00151 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM1O00151 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM1O00151 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 AC012254.3-201ENST00000591183 2117 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM1O00151 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM1O00151 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 LINC01613-201ENST00000561476 2780 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
PDLIM1O00151 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM1O00151 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDLIM1O00151 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDLIM1O00151 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM1O00151 RNA5SP198-201ENST00000410376 127 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM1O00151 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM1O00151 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM1O00151 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM1O00151 NPM1P33-201ENST00000438918 872 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM1O00151 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM1O00151 RN7SL352P-201ENST00000466002 277 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM1O00151 EIF4E2P2-201ENST00000492033 736 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 AL117692.1-201ENST00000494283 713 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 AC093890.1-201ENST00000502554 540 ntBASIC5.69□□□□□ -1.5
PDLIM1O00151 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM1O00151 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM1O00151 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms