Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 DYNLL1P1-201ENST00000595442 269 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF85-208ENST00000597314 563 ntTSL 4 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 SMIM7-214ENST00000597711 1075 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 OR7E94P-202ENST00000601375 790 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 NDUFB9P1-201ENST00000604683 510 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 uc_338.33-201ENST00000614988 170 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC244517.3-201ENST00000616254 1235 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 MIR6785-201ENST00000618984 81 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AC087894.3-201ENST00000623682 349 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 AL592182.3-201ENST00000642132 3304 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 MTND4P26-201ENST00000415971 1359 ntBASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.08□□□□□ -1.92
CHKB-CPT1BH3BT56 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 SAMD3-201ENST00000324172 993 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 SNORA43.1-201ENST00000364863 140 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC013442.1-201ENST00000397347 228 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 GAPDHP15-201ENST00000398586 975 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 RANP6-201ENST00000413691 644 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 RPLP1P10-201ENST00000413972 339 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 OR51A6P-201ENST00000418680 1004 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC104333.2-201ENST00000422630 192 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 RPS12P5-201ENST00000423449 371 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 RPL19P21-201ENST00000424919 591 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 GAPDHP19-201ENST00000431768 1005 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 ARMC8P1-201ENST00000443069 1289 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 CYCSP24-201ENST00000445119 316 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC139451.1-201ENST00000463176 330 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 RPL5P30-201ENST00000465511 891 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC112206.1-201ENST00000468416 477 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 RN7SL390P-201ENST00000470634 284 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 PFN1P6-201ENST00000476786 399 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 PPP1R2P6-201ENST00000478565 588 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 RPL5P14-201ENST00000494197 878 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 OXR1-212ENST00000521592 993 ntTSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 PDCD5P1-201ENST00000543528 309 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC008055.1-201ENST00000547032 609 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC008126.1-201ENST00000549019 480 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 MRPS21P8-201ENST00000569196 235 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC009171.1-201ENST00000572673 266 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 MIR4675-201ENST00000577898 77 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 PRPF19P1-201ENST00000584766 898 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC005758.1-201ENST00000586408 625 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 SMARCE1P7-201ENST00000605515 485 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AL627309.1-205ENST00000610542 723 ntTSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 SNX18P1Y-201ENST00000616231 511 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC027506.1-201ENST00000621395 198 ntBASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AC244517.9-201ENST00000624102 434 ntTSL 3 BASIC3.07□□□□□ -1.92
CHKB-CPT1BH3BT56 AL356121.2-201ENST00000624715 780 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms