Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 MT1CP-201ENST00000567054 174 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AL078601.3-201ENST00000573303 535 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC060780.2-201ENST00000589047 198 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC006115.2-201ENST00000596823 202 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 AC068768.2-201ENST00000602352 343 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TCRBV7S3A2A0A539 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 MFSD8-239ENST00000641590 2479 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 MIR551B-201ENST00000384984 96 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 YWHAZP6-201ENST00000399764 738 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC099782.1-201ENST00000425889 474 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 MTND4LP7-201ENST00000431728 294 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AL445928.1-201ENST00000435545 222 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 VN1R48P-201ENST00000448149 1036 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC004129.2-201ENST00000457229 287 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 RPL29P23-201ENST00000486188 442 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 OR9N1P-201ENST00000491296 333 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC083795.1-201ENST00000491760 320 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC008629.2-201ENST00000503783 483 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC010547.7-201ENST00000570323 333 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC025857.2-201ENST00000602711 238 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC084824.5-201ENST00000612009 413 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 uc_338.29-201ENST00000615099 168 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC073488.3-201ENST00000631611 778 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC004076.2-201ENST00000620532 3323 ntBASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.01□□□□□ -1.45
TCRBV7S3A2A0A539 AL929601.4-201ENST00000613011 1341 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 MTCO1P28-201ENST00000574177 1528 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 MFSD8-219ENST00000641228 2559 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 RNU4-39P-201ENST00000362455 127 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 RN7SKP78-201ENST00000364711 318 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 RPSAP65-201ENST00000429660 595 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 NPM1P25-201ENST00000429734 854 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AC108479.1-201ENST00000431142 427 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AL353662.1-201ENST00000439099 327 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms