Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC074087.1-201ENST00000512059 724 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 RNA5SP249-201ENST00000516127 99 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 RNA5SP318-201ENST00000516352 92 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 ARL17A-204ENST00000570550 491 ntAPPRIS ALT2 TSL 3 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 ARL17B-204ENST00000571246 491 ntTSL 3 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 OR1E3-201ENST00000575608 948 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC018737.1-201ENST00000603900 204 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AL451054.3-201ENST00000611115 776 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC068134.4-201ENST00000613365 122 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC106782.7-201ENST00000624024 418 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC133555.5-201ENST00000624430 418 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 MIR193BHG-210ENST00000641327 515 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 ATP6V1C1-203ENST00000518857 1501 ntTSL 2 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC107027.3-201ENST00000565095 3473 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC017104.4-201ENST00000636283 1592 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC100757.1-201ENST00000616872 1835 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC093535.2-201ENST00000624769 2326 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 RBMY1HP-201ENST00000382759 1389 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 ERVFRD-3-201ENST00000578561 1617 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 AC090774.4-201ENST00000578888 1372 ntBASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LINC01558Q9Y6Z2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AL450345.1-202ENST00000605741 3881 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RBP2-201ENST00000232217 694 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 FO393411.1-201ENST00000325612 420 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RNU6-984P-201ENST00000363236 109 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RN7SKP45-201ENST00000363509 304 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 TRAV35-201ENST00000390462 330 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 HSPD1P16-201ENST00000402302 394 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AP000580.1-201ENST00000404439 358 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 HDGFP1-201ENST00000405943 252 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RNA5SP104-201ENST00000410989 118 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 EIF4A1P3-201ENST00000411521 244 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RAC1P3-201ENST00000416129 580 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 OR51A6P-201ENST00000418680 1004 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 PDSS1P1-201ENST00000422953 1114 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 ELOBP4-201ENST00000423418 296 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 Z74696.1-201ENST00000428208 1123 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RPL3P11-201ENST00000434028 1146 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AC007679.3-201ENST00000434035 414 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AC046176.1-201ENST00000435260 1170 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AC104306.1-201ENST00000449702 371 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RPLP0P1-201ENST00000457002 361 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RPL10P6-201ENST00000457497 318 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AC107015.1-201ENST00000466902 747 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RN7SL688P-201ENST00000471754 275 ntBASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.85□□□□□ -1.95
LINC01558Q9Y6Z2 RN7SL817P-201ENST00000480777 288 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms