Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 MIR3154-201ENST00000577829 84 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AL589863.1-201ENST00000595383 631 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC011458.1-201ENST00000604034 617 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC025175.1-201ENST00000606482 759 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC008759.3-201ENST00000613300 508 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 MIR7109-201ENST00000613748 65 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC004801.6-201ENST00000616571 978 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 TCL6_3.1-201ENST00000619064 137 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC111152.1-202ENST00000635848 339 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL4A3BPQ9Y5P4 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
COL4A3BPQ9Y5P4 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.15□□□□□ -1.27
COL4A3BPQ9Y5P4 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.15□□□□□ -1.27
COL4A3BPQ9Y5P4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL4A3BPQ9Y5P4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.15□□□□□ -1.27
COL4A3BPQ9Y5P4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL4A3BPQ9Y5P4 OLMALINC-203ENST00000641087 3779 ntBASIC7.15□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.15□□□□□ -1.27
COL4A3BPQ9Y5P4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL4A3BPQ9Y5P4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 OOSP1-201ENST00000398992 1270 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 MIR1275-201ENST00000408770 80 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 RPL23AP18-201ENST00000416139 468 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 HSPE1P16-201ENST00000426640 348 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 RLIMP2-201ENST00000427891 1563 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 RPS27P5-201ENST00000444247 244 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 OR2L9P-201ENST00000444456 913 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 HMGN1P5-201ENST00000448591 263 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC118758.1-202ENST00000454719 225 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 RN7SL552P-201ENST00000462094 276 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC104339.1-201ENST00000465478 348 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 IGKV1D-22-201ENST00000518953 324 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 IGHV1-14-201ENST00000523391 241 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 OR4A6P-201ENST00000534364 970 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC139697.1-201ENST00000548429 745 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 OR1E3-201ENST00000575608 948 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC090616.1-201ENST00000583895 447 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AL591926.1-201ENST00000620542 217 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AL683826.1-201ENST00000624104 627 ntBASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A3BPQ9Y5P4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC009779.8-201ENST00000641684 4384 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 AC125238.2-201ENST00000430003 1440 ntBASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.13□□□□□ -1.27
COL4A3BPQ9Y5P4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms