Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 AC013488.1-201ENST00000526618 1838 ntBASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGA6Q9Y5G7 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 RNA5SP321-201ENST00000362722 111 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 HMGB1P13-201ENST00000406019 642 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 RN7SKP86-201ENST00000410454 332 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC092447.3-201ENST00000426027 686 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 HSPE1P16-201ENST00000426640 348 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 ETF1P3-201ENST00000430422 1160 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC005189.1-201ENST00000431286 310 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 HMGB3P10-201ENST00000434734 572 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AL645939.3-201ENST00000435408 225 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 MTCO1P53-201ENST00000441633 699 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 COL11A2P1-205ENST00000441798 676 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 EEF1B2P3-201ENST00000447718 678 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC083806.1-201ENST00000468934 316 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC021146.5-201ENST00000503544 545 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 PRELID3BP5-201ENST00000508612 460 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 SNORA31.13-201ENST00000516624 135 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC109635.6-201ENST00000525487 1113 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC037479.1-201ENST00000558361 625 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 MTATP6P24-201ENST00000576835 677 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 MIR4310-201ENST00000582950 57 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 Z82195.1-201ENST00000604558 398 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC018618.2-201ENST00000604770 446 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AL035410.2-201ENST00000604963 864 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC012676.3-201ENST00000614983 479 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 uc_338.29-201ENST00000615099 168 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 OR1N1-202ENST00000619659 939 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC022079.2-201ENST00000619739 566 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC024023.1-201ENST00000624530 922 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 AC079949.2-201ENST00000617117 2933 ntBASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHGA6Q9Y5G7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms