Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VTA1Q9NP79 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VTA1Q9NP79 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VTA1Q9NP79 RAD1P1-201ENST00000231383 813 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VTA1Q9NP79 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
VTA1Q9NP79 AL031985.1-201ENST00000392713 418 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC046176.1-201ENST00000435260 1170 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 VN1R38P-201ENST00000450265 887 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC096754.1-201ENST00000508904 818 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 RNA5SP434-201ENST00000516647 121 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VTA1Q9NP79 C1DP5-201ENST00000525775 383 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC008147.3-201ENST00000548666 354 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC009120.3-201ENST00000563335 499 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC090236.2-201ENST00000587933 1101 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC018754.1-201ENST00000607486 925 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC027449.1-201ENST00000608890 407 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC008759.3-201ENST00000613300 508 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 MIR1264-201ENST00000616374 69 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 AC025809.2-201ENST00000625085 1802 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 KARSP1-201ENST00000451871 1752 ntBASIC7.05□□□□□ -1.28
VTA1Q9NP79 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VTA1Q9NP79 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.05□□□□□ -1.28
VTA1Q9NP79 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC024651.2-201ENST00000562480 2098 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 ATP5F1P6-201ENST00000402768 767 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 RNA5SP156-201ENST00000410250 110 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 RNU6-584P-201ENST00000410350 95 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 RANP4-201ENST00000413361 655 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC073310.1-201ENST00000423226 1033 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 RPL23AP19-201ENST00000436229 369 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC098826.2-201ENST00000452011 651 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC092824.1-201ENST00000483524 576 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 RNA5SP116-201ENST00000516132 98 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 Y_RNA.710-201ENST00000516975 110 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 HMGB1P46-201ENST00000520062 610 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 QTRT1P1-201ENST00000604344 1078 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC112503.2-201ENST00000609005 552 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC063944.3-201ENST00000609969 533 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC022106.1-201ENST00000612834 766 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 AL050303.3-201ENST00000613704 284 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC073488.3-201ENST00000631611 778 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 MAPK10-350ENST00000641777 965 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 AL136531.3-201ENST00000624378 3658 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms