Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC008429.2-201ENST00000523057 864 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 OR4A17P-201ENST00000526032 904 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AP003033.2-201ENST00000528901 805 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC024267.2-201ENST00000582737 417 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL451064.1-201ENST00000607718 471 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL359091.2-201ENST00000609303 556 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 CYCSP41-201ENST00000616920 296 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC093875.1-201ENST00000623688 504 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AC092724.1-201ENST00000624623 3397 ntBASIC6□□□□□ -1.45
AMBRA1Q9C0C7 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
AMBRA1Q9C0C7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 BIN2P1-201ENST00000504996 1530 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 MTCO1P15-201ENST00000529569 1526 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC092701.1-201ENST00000623627 1551 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 RNU4-40P-201ENST00000364351 143 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 SNORD94-201ENST00000386037 137 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC096533.1-201ENST00000411645 353 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 RAB9AP4-201ENST00000415230 609 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC092865.3-201ENST00000425390 1026 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC021876.1-201ENST00000425959 359 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 RAB9AP5-201ENST00000437794 597 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AL031681.1-201ENST00000443304 400 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 RAB9AP2-201ENST00000443911 597 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AL022237.1-201ENST00000446663 358 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC018638.3-201ENST00000461273 132 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 RN7SL37P-201ENST00000490461 307 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC067904.2-201ENST00000517322 1283 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC008147.3-201ENST00000548666 354 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC090888.2-201ENST00000559765 1144 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AGGF1P9-201ENST00000561884 913 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 OR4H6P-201ENST00000563771 921 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC005412.1-201ENST00000580812 1049 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 EIF1P5-201ENST00000585002 234 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC107993.1-201ENST00000591343 684 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AF230666.2-201ENST00000602328 725 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC091133.5-201ENST00000603088 301 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AL669942.2-201ENST00000620352 697 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC005858.3-201ENST00000624756 589 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 AC019226.2-201ENST00000625973 424 ntBASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
AMBRA1Q9C0C7 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms