Protein–RNA interactions for Protein: Q9BXW4

MAP1LC3C, Microtubule-associated proteins 1A/1B light chain 3C, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3CQ9BXW4 LRRC37A15P-201ENST00000514785 1355 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC090971.4-201ENST00000560291 1800 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 OR9K1P-201ENST00000326513 941 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RNA5SP321-201ENST00000362722 111 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RN7SKP74-201ENST00000362849 309 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RNU4-81P-201ENST00000363561 144 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RN7SKP76-201ENST00000364419 323 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RNA5SP223-201ENST00000365174 120 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 MIR197-201ENST00000384976 75 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RPS3AP5-201ENST00000389400 821 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC093719.1-202ENST00000392735 373 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 MYL6P5-201ENST00000412707 459 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 BSNDP4-201ENST00000436076 388 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC009518.3-201ENST00000438972 253 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RAB28P3-201ENST00000448325 597 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RPS20P23-201ENST00000461683 354 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RPSAP48-201ENST00000466509 889 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RN7SL390P-201ENST00000470634 284 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RN7SL702P-201ENST00000488394 292 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AL049874.2-201ENST00000492636 288 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC107956.2-201ENST00000496042 454 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 GAPDHP62-201ENST00000515313 990 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 PDCL3P1-201ENST00000534575 734 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 OR4C49P-201ENST00000563891 900 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC106730.2-201ENST00000566641 540 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 DYNLL1P1-201ENST00000595442 269 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RN7SL760P-201ENST00000607344 270 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC015922.4-201ENST00000612568 690 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 MIR7854-201ENST00000620068 65 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 MTCO1P1-201ENST00000624263 1081 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AL035425.4-201ENST00000624509 1063 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC110792.3-201ENST00000595906 1614 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC011755.1-201ENST00000623763 2049 ntBASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.31□□□□□ -1.72
MAP1LC3CQ9BXW4 AC010329.2-201ENST00000595195 2737 ntBASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 LINC01355-201ENST00000566551 5444 ntBASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 MTCO1P22-201ENST00000604619 1360 ntBASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 PSMC1P6-201ENST00000477233 1319 ntBASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MAP1LC3CQ9BXW4 AC074375.1-201ENST00000372993 192 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms