Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC006600.2-201ENST00000624834 2506 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
ERCC4Q92889 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
ERCC4Q92889 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC4Q92889 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
ERCC4Q92889 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 RNU1-84P-201ENST00000365447 164 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC4Q92889 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
ERCC4Q92889 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC245036.1-201ENST00000391727 309 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.09□□□□□ -1.27
ERCC4Q92889 MTND4LP21-201ENST00000415303 295 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 RPL12P43-201ENST00000420608 499 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC4Q92889 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AL513321.1-201ENST00000441175 761 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 AC073072.2-201ENST00000447425 348 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC4Q92889 RNU7-157P-201ENST00000459600 66 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 MTCO2P6-201ENST00000463134 685 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC4Q92889 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.09□□□□□ -1.27
ERCC4Q92889 LARP7P4-201ENST00000481075 878 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 RN7SL350P-201ENST00000492591 299 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 AC093815.1-201ENST00000508637 280 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC4Q92889 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.09□□□□□ -1.27
ERCC4Q92889 RNU6-943P-201ENST00000516960 98 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 AC103833.1-201ENST00000517442 172 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AP003355.1-201ENST00000518956 587 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC4Q92889 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC007494.1-201ENST00000562293 760 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.09□□□□□ -1.27
ERCC4Q92889 VN1R81P-201ENST00000602085 372 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AL451064.1-201ENST00000607718 471 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC007275.1-201ENST00000621243 671 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 AP003476.1-201ENST00000623984 516 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
ERCC4Q92889 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
ERCC4Q92889 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC4Q92889 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC4Q92889 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.09□□□□□ -1.27
ERCC4Q92889 AC096921.2-201ENST00000561507 1916 ntBASIC7.09□□□□□ -1.27
ERCC4Q92889 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.09□□□□□ -1.28
ERCC4Q92889 AC005261.2-201ENST00000593427 4258 ntBASIC7.09□□□□□ -1.28
ERCC4Q92889 AC010401.2-201ENST00000575137 4934 ntBASIC7.09□□□□□ -1.28
ERCC4Q92889 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
ERCC4Q92889 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.09□□□□□ -1.28
ERCC4Q92889 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.09□□□□□ -1.28
ERCC4Q92889 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
ERCC4Q92889 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.08□□□□□ -1.28
ERCC4Q92889 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 AL161912.4-201ENST00000623889 2468 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
ERCC4Q92889 SHQ1P1-201ENST00000437111 1544 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ERCC4Q92889 AL121839.2-201ENST00000565058 6943 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 RNU1-5P-201ENST00000362684 144 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 RNA5SP350-201ENST00000363298 111 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC4Q92889 MIR433-201ENST00000384837 93 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 RN7SKP205-201ENST00000410999 307 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 PCNPP4-201ENST00000414817 517 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC4Q92889 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.08□□□□□ -1.28
ERCC4Q92889 COL11A2P1-205ENST00000441798 676 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 DUXAP8-207ENST00000456786 622 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 RARRES2P3-201ENST00000457739 473 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
ERCC4Q92889 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC4Q92889 PRELID3BP6-201ENST00000503839 571 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC4Q92889 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.08□□□□□ -1.28
ERCC4Q92889 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC4Q92889 AC106800.3-201ENST00000511389 308 ntBASIC7.08□□□□□ -1.28
ERCC4Q92889 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC4Q92889 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7.08□□□□□ -1.28
ERCC4Q92889 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC4Q92889 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms