Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC069439.1-201ENST00000494739 167 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 OR7E85P-201ENST00000512164 985 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 HMGB1P23-201ENST00000518743 568 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 SNRPCP14-201ENST00000524498 205 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AP000435.1-201ENST00000528539 496 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 SERPINA15P-201ENST00000529287 266 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 SDHCP4-201ENST00000532834 510 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC005479.1-201ENST00000554629 451 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MPPE1P1-201ENST00000557286 1076 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AL023284.4-201ENST00000564248 374 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MRPL45P2-203ENST00000573318 473 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 RN7SL203P-201ENST00000579600 296 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC090616.5-202ENST00000582111 297 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 SNX29P2-204ENST00000603801 875 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC005034.5-201ENST00000604219 466 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 MEMO1P5-201ENST00000604810 406 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC008536.2-201ENST00000607284 349 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC007497.1-201ENST00000610421 561 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AL359535.1-201ENST00000612100 1087 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 UBE2Q2P2-203ENST00000613592 761 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 U1.34-201ENST00000618578 162 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC018926.3-201ENST00000618841 406 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AP003122.6-201ENST00000623831 495 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC137056.2-201ENST00000624055 1958 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC123769.2-201ENST00000624332 5984 ntBASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
DEPDC4Q8N2C3 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
DEPDC4Q8N2C3 MTND4P16-201ENST00000466108 1367 ntBASIC7.46□□□□□ -1.21
DEPDC4Q8N2C3 AL136298.2-201ENST00000556497 1570 ntBASIC7.46□□□□□ -1.21
DEPDC4Q8N2C3 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.46□□□□□ -1.21
DEPDC4Q8N2C3 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
DEPDC4Q8N2C3 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
DEPDC4Q8N2C3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
DEPDC4Q8N2C3 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
DEPDC4Q8N2C3 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 FUNDC2P3-201ENST00000334716 533 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 MED15P8-201ENST00000411601 545 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AL953862.1-201ENST00000423016 168 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 BMS1P19-201ENST00000433925 393 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 HMGB3P10-201ENST00000434734 572 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 RPL37P21-201ENST00000435890 276 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AL772284.1-201ENST00000443421 905 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 RPS27AP15-201ENST00000447672 466 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AL139156.3-201ENST00000454802 394 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 RPL5P15-201ENST00000475870 897 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 RN7SL130P-201ENST00000489463 305 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 RPL34P29-201ENST00000491411 325 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC079382.1-201ENST00000493346 557 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 RN7SL598P-201ENST00000494391 294 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 RNU6-875P-201ENST00000516488 106 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 RNU6-358P-201ENST00000516564 75 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 AC006065.2-201ENST00000536978 211 ntBASIC7.46□□□□□ -1.22
DEPDC4Q8N2C3 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms