Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC010894.1-201ENST00000313760 361 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 RNU1-5P-201ENST00000362684 144 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 RNU1-55P-201ENST00000365510 158 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 FDPSP5-201ENST00000399474 1057 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 MFSD13B-201ENST00000420133 1290 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 DNAJA1P5-201ENST00000440278 943 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 RPS18P1-201ENST00000447840 458 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AL121578.2-201ENST00000448797 447 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 CCRL1P1-201ENST00000449542 1053 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 MTND1P27-201ENST00000451117 902 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 Z95152.1-201ENST00000453556 656 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC005410.1-202ENST00000460347 485 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 RPS3AP49-201ENST00000472161 790 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC044810.1-201ENST00000480271 711 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC023818.1-201ENST00000498379 384 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC010306.1-201ENST00000523223 1117 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AP000926.4-201ENST00000527351 454 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC023050.2-201ENST00000544968 387 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC016144.1-201ENST00000548175 1087 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 NDUFA5P11-201ENST00000567995 343 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC007346.1-201ENST00000569208 867 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 MIR4789-201ENST00000577469 82 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC139493.1-201ENST00000604368 397 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC121247.2-201ENST00000604776 136 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC024060.1-201ENST00000607052 494 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC007349.4-201ENST00000608114 532 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC131159.1-201ENST00000621854 213 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AP001962.1-201ENST00000624114 559 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AL596275.2-208ENST00000641192 594 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 EPS15P1-202ENST00000459691 2071 ntBASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM48Q8IWZ4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.59□□□□□ -1.36
TRIM48Q8IWZ4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.59□□□□□ -1.36
TRIM48Q8IWZ4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TRIM48Q8IWZ4 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TRIM48Q8IWZ4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.36
TRIM48Q8IWZ4 AC021755.1-201ENST00000559747 1447 ntBASIC6.59□□□□□ -1.36
TRIM48Q8IWZ4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC005261.4-201ENST00000600047 1385 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 RNA5SP308-201ENST00000362532 115 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 MIR191-201ENST00000384873 92 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AL391422.1-201ENST00000402155 436 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AL096711.1-201ENST00000404780 554 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AL356131.1-201ENST00000405826 414 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 QRSL1P2-201ENST00000418582 964 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 SEPT2P1-201ENST00000419651 180 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 GLUD1P9-201ENST00000420997 1173 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 Z82198.3-201ENST00000421145 199 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC239367.3-201ENST00000428996 814 ntBASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM48Q8IWZ4 SUMO2P8-201ENST00000434672 286 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms