Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 HMGN1P32-201ENST00000441744 256 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 MTCO1P19-201ENST00000443487 500 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 CCRL1P1-201ENST00000449542 1053 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 MRPL35P4-201ENST00000453682 566 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AL157777.1-201ENST00000468100 304 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 RPS16P9-201ENST00000477220 427 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC095057.1-201ENST00000507583 168 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 NACAP6-201ENST00000509572 622 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC109471.1-201ENST00000511631 612 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC139713.1-202ENST00000512366 460 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC106800.2-201ENST00000514009 1103 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 RN7SKP183-201ENST00000517169 324 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 OR4A17P-201ENST00000526032 904 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC090616.2-202ENST00000584248 222 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC015801.1-201ENST00000585651 153 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC079089.3-201ENST00000603094 673 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AL031777.2-201ENST00000611953 196 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC016769.4-201ENST00000616893 535 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 RBM12B-AS1-201ENST00000623283 653 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AL596275.2-203ENST00000641951 371 ntBASIC7.39□□□□□ -1.23
RNF43Q68DV7 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF43Q68DV7 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RNF43Q68DV7 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF43Q68DV7 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF43Q68DV7 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF43Q68DV7 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 CDY7P-201ENST00000429883 1604 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF43Q68DV7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF43Q68DV7 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF43Q68DV7 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF43Q68DV7 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF43Q68DV7 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 Y_RNA.303-201ENST00000364998 94 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 SNORA70.5-201ENST00000365519 135 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 MIR152-201ENST00000385212 87 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 RNU1-56P-201ENST00000391303 164 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 RN7SKP148-201ENST00000410179 275 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 CCDC58P2-201ENST00000417131 366 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 MGAT2P2-201ENST00000427194 797 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF43Q68DV7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 RPL31P11-202ENST00000454082 372 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 PSPC1P2-201ENST00000455130 225 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 RPSAP48-201ENST00000466509 889 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 MTCO3P38-201ENST00000468910 766 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 RN7SL502P-201ENST00000481857 290 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 AL135933.1-201ENST00000498657 802 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 AC113430.1-201ENST00000506872 718 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 RNA5SP518-201ENST00000515957 119 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 OR5M6P-201ENST00000530227 937 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 AC027667.1-201ENST00000545814 304 ntBASIC7.38□□□□□ -1.23
RNF43Q68DV7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.38□□□□□ -1.23
RNF43Q68DV7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms