Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.03□□□□□ -1.12
PTCH1Q13635 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.03□□□□□ -1.12
PTCH1Q13635 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.03□□□□□ -1.12
PTCH1Q13635 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
PTCH1Q13635 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
PTCH1Q13635 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
PTCH1Q13635 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 RNU1-106P-201ENST00000384382 164 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 MIR130A-201ENST00000385274 89 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 AL109941.1-201ENST00000401925 229 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AL139128.1-201ENST00000413921 941 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 AC023141.8-201ENST00000442554 208 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 AC079922.1-201ENST00000443291 359 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC8.03□□□□□ -1.12
PTCH1Q13635 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.03□□□□□ -1.12
PTCH1Q13635 RPL7P39-201ENST00000481157 744 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AC074255.1-201ENST00000511259 501 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.03□□□□□ -1.12
PTCH1Q13635 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC8.03□□□□□ -1.12
PTCH1Q13635 AC004890.3-201ENST00000605566 1095 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 AL731566.2-201ENST00000618971 317 ntBASIC8.03□□□□□ -1.12
PTCH1Q13635 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC8.03□□□□□ -1.12
PTCH1Q13635 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
PTCH1Q13635 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
PTCH1Q13635 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
PTCH1Q13635 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PTCH1Q13635 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PTCH1Q13635 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
PTCH1Q13635 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PTCH1Q13635 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.02□□□□□ -1.13
PTCH1Q13635 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC8.02□□□□□ -1.13
PTCH1Q13635 AC130304.1-201ENST00000622942 2385 ntBASIC8.02□□□□□ -1.13
PTCH1Q13635 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PTCH1Q13635 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PTCH1Q13635 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PTCH1Q13635 RN7SKP28-201ENST00000364770 305 ntBASIC8.02□□□□□ -1.13
PTCH1Q13635 FAR2P2-201ENST00000413041 594 ntBASIC8.02□□□□□ -1.13
PTCH1Q13635 AC108075.1-201ENST00000424692 529 ntBASIC8.02□□□□□ -1.13
PTCH1Q13635 FAR2P4-202ENST00000425399 584 ntBASIC8.02□□□□□ -1.13
PTCH1Q13635 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.02□□□□□ -1.13
PTCH1Q13635 HIGD1AP8-201ENST00000453927 274 ntBASIC8.02□□□□□ -1.13
PTCH1Q13635 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC8.02□□□□□ -1.13
PTCH1Q13635 AL672167.3-201ENST00000465951 960 ntBASIC8.02□□□□□ -1.13
PTCH1Q13635 CEACAMP10-202ENST00000495431 496 ntBASIC8.02□□□□□ -1.13
PTCH1Q13635 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
PTCH1Q13635 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.02□□□□□ -1.13
PTCH1Q13635 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.02□□□□□ -1.13
PTCH1Q13635 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.02□□□□□ -1.13
PTCH1Q13635 AL034408.1-201ENST00000637712 664 ntBASIC8.02□□□□□ -1.13
PTCH1Q13635 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.02□□□□□ -1.13
PTCH1Q13635 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PTCH1Q13635 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PTCH1Q13635 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.01□□□□□ -1.13
PTCH1Q13635 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8.01□□□□□ -1.13
PTCH1Q13635 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PTCH1Q13635 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PTCH1Q13635 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PTCH1Q13635 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.01□□□□□ -1.13
PTCH1Q13635 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PTCH1Q13635 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PTCH1Q13635 AL161912.4-201ENST00000623889 2468 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
PTCH1Q13635 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.01□□□□□ -1.13
PTCH1Q13635 AL353763.1-201ENST00000624467 1628 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PTCH1Q13635 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PTCH1Q13635 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.01□□□□□ -1.13
PTCH1Q13635 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PTCH1Q13635 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC8.01□□□□□ -1.13
PTCH1Q13635 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.01□□□□□ -1.13
PTCH1Q13635 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
PTCH1Q13635 AL589647.1-201ENST00000402485 466 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 NIFKP3-201ENST00000417799 865 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC8.01□□□□□ -1.13
PTCH1Q13635 AC007568.1-201ENST00000422912 471 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 PRUNEP1-201ENST00000425846 705 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 CYCSP6-201ENST00000434498 302 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 OR6D1P-201ENST00000436165 939 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 AP000547.1-201ENST00000454360 617 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 AC072052.1-201ENST00000496556 306 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 AC093890.1-201ENST00000502554 540 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 AC022832.1-201ENST00000530718 645 ntBASIC8.01□□□□□ -1.13
PTCH1Q13635 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.01□□□□□ -1.13
PTCH1Q13635 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms