Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AL158152.1-201ENST00000602652 1435 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 COX6B1P3-201ENST00000312310 260 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 RNFT1P3-201ENST00000340898 1052 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 RPL11P3-201ENST00000395256 523 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AL590399.4-201ENST00000436561 601 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AMYP1-201ENST00000440059 1023 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 GEMIN2P1-201ENST00000454246 752 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AP002884.1-201ENST00000479691 655 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 RN7SL284P-201ENST00000498823 275 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 RBBP4P1-201ENST00000502424 1276 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AC105384.2-201ENST00000508433 640 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 RN7SKP70-201ENST00000516655 271 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AC005244.1-201ENST00000582566 339 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 AC027279.4-201ENST00000624371 2072 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 QRSL1P1-201ENST00000400977 1540 ntBASIC5.58□□□□□ -1.52
HMGCS1Q01581 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HMGCS1Q01581 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS1Q01581 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC093297.3-201ENST00000607056 2517 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC104964.3-201ENST00000606115 2860 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 IFIT1P1-201ENST00000400497 1449 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC093225.1-201ENST00000506867 1408 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC025470.1-201ENST00000510053 2032 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC004656.1-201ENST00000568479 4951 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC087752.1-201ENST00000391360 558 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC069154.1-201ENST00000432914 542 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 DEFA9P-201ENST00000433042 285 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 ATP5LP2-201ENST00000440646 311 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC073072.2-201ENST00000447425 348 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 Z83838.1-202ENST00000456225 839 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC093166.4-201ENST00000457867 318 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC068228.1-201ENST00000461723 211 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 IGLV3-30-201ENST00000524362 298 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 BCAS2P1-201ENST00000528022 632 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS1Q01581 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 AC091078.2-201ENST00000557145 559 ntBASIC5.57□□□□□ -1.52
HMGCS1Q01581 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS1Q01581 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms