Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM4P67936 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM4P67936 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
TPM4P67936 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM4P67936 AC010086.1-201ENST00000437359 1052 ntBASIC6.46□□□□□ -1.38
TPM4P67936 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.46□□□□□ -1.38
TPM4P67936 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM4P67936 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM4P67936 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TPM4P67936 AC023245.1-201ENST00000468501 517 ntBASIC6.46□□□□□ -1.38
TPM4P67936 RPL12P30-201ENST00000488389 499 ntBASIC6.46□□□□□ -1.38
TPM4P67936 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.46□□□□□ -1.38
TPM4P67936 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.46□□□□□ -1.38
TPM4P67936 AC131935.1-201ENST00000524621 333 ntBASIC6.46□□□□□ -1.38
TPM4P67936 NPIPB14P-203ENST00000532298 987 ntBASIC6.46□□□□□ -1.38
TPM4P67936 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.46□□□□□ -1.38
TPM4P67936 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM4P67936 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.46□□□□□ -1.38
TPM4P67936 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.46□□□□□ -1.38
TPM4P67936 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.46□□□□□ -1.38
TPM4P67936 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.46□□□□□ -1.38
TPM4P67936 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.46□□□□□ -1.38
TPM4P67936 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.46□□□□□ -1.38
TPM4P67936 AC063977.7-201ENST00000594454 337 ntBASIC6.46□□□□□ -1.38
TPM4P67936 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM4P67936 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TPM4P67936 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.46□□□□□ -1.38
TPM4P67936 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TPM4P67936 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM4P67936 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.46□□□□□ -1.38
TPM4P67936 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
TPM4P67936 AL078595.2-201ENST00000605309 1780 ntBASIC6.46□□□□□ -1.38
TPM4P67936 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM4P67936 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.46□□□□□ -1.38
TPM4P67936 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM4P67936 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM4P67936 AC012254.3-201ENST00000591183 2117 ntBASIC6.46□□□□□ -1.38
TPM4P67936 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM4P67936 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM4P67936 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM4P67936 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM4P67936 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
TPM4P67936 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM4P67936 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TPM4P67936 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM4P67936 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TPM4P67936 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM4P67936 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM4P67936 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TPM4P67936 PSMA6P1-201ENST00000400275 741 ntBASIC6.45□□□□□ -1.38
TPM4P67936 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM4P67936 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM4P67936 AL359265.1-201ENST00000440296 795 ntBASIC6.45□□□□□ -1.38
TPM4P67936 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM4P67936 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM4P67936 SNORD125-201ENST00000459538 96 ntBASIC6.45□□□□□ -1.38
TPM4P67936 RN7SL393P-201ENST00000463588 296 ntBASIC6.45□□□□□ -1.38
TPM4P67936 PSAT1P4-201ENST00000466500 526 ntBASIC6.45□□□□□ -1.38
TPM4P67936 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM4P67936 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.45□□□□□ -1.38
TPM4P67936 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM4P67936 AL359219.2-201ENST00000555184 348 ntBASIC6.45□□□□□ -1.38
TPM4P67936 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.45□□□□□ -1.38
TPM4P67936 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM4P67936 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.45□□□□□ -1.38
TPM4P67936 AL591222.2-201ENST00000604443 754 ntBASIC6.45□□□□□ -1.38
TPM4P67936 AC145423.1-201ENST00000605712 336 ntBASIC6.45□□□□□ -1.38
TPM4P67936 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM4P67936 MIR6736-201ENST00000616799 59 ntBASIC6.45□□□□□ -1.38
TPM4P67936 MIR6829-201ENST00000620375 67 ntBASIC6.45□□□□□ -1.38
TPM4P67936 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM4P67936 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TPM4P67936 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM4P67936 AC007938.2-201ENST00000604666 2634 ntBASIC6.45□□□□□ -1.38
TPM4P67936 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM4P67936 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM4P67936 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM4P67936 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.44□□□□□ -1.38
TPM4P67936 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TPM4P67936 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM4P67936 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TPM4P67936 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.44□□□□□ -1.38
TPM4P67936 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.44□□□□□ -1.38
TPM4P67936 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TPM4P67936 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TPM4P67936 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.44□□□□□ -1.38
TPM4P67936 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.44□□□□□ -1.38
TPM4P67936 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.44□□□□□ -1.38
TPM4P67936 AL136231.1-201ENST00000429407 730 ntBASIC6.44□□□□□ -1.38
TPM4P67936 RPS12P17-201ENST00000438591 377 ntBASIC6.44□□□□□ -1.38
TPM4P67936 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.44□□□□□ -1.38
TPM4P67936 OR7E116P-201ENST00000448529 957 ntBASIC6.44□□□□□ -1.38
TPM4P67936 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.44□□□□□ -1.38
TPM4P67936 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.44□□□□□ -1.38
TPM4P67936 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.44□□□□□ -1.38
TPM4P67936 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.44□□□□□ -1.38
TPM4P67936 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.44□□□□□ -1.38
TPM4P67936 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TPM4P67936 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.44□□□□□ -1.38
TPM4P67936 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms