Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 NPIPB14P-203ENST00000532298 987 ntBASIC3.99□□□□□ -1.77
RPL39P62891 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC3.99□□□□□ -1.77
RPL39P62891 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC3.99□□□□□ -1.77
RPL39P62891 MIR4660-201ENST00000583549 74 ntBASIC3.99□□□□□ -1.77
RPL39P62891 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC3.99□□□□□ -1.77
RPL39P62891 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC3.99□□□□□ -1.77
RPL39P62891 MIR212-201ENST00000586026 110 ntBASIC3.99□□□□□ -1.77
RPL39P62891 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC3.99□□□□□ -1.77
RPL39P62891 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC3.99□□□□□ -1.77
RPL39P62891 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RPL39P62891 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC3.99□□□□□ -1.77
RPL39P62891 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.99□□□□□ -1.77
RPL39P62891 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
RPL39P62891 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC3.99□□□□□ -1.77
RPL39P62891 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
RPL39P62891 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RPL39P62891 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC3.99□□□□□ -1.77
RPL39P62891 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 AC144833.1-201ENST00000567953 4089 ntBASIC3.99□□□□□ -1.77
RPL39P62891 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
RPL39P62891 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPL39P62891 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RPL39P62891 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
RPL39P62891 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC3.98□□□□□ -1.77
RPL39P62891 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.98□□□□□ -1.77
RPL39P62891 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC3.98□□□□□ -1.77
RPL39P62891 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
RPL39P62891 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 RN7SKP186-201ENST00000365371 303 ntBASIC3.98□□□□□ -1.77
RPL39P62891 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RPL39P62891 MIR27A-201ENST00000385073 78 ntBASIC3.98□□□□□ -1.77
RPL39P62891 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RPL39P62891 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RPL39P62891 PEX12P1-201ENST00000400284 1048 ntBASIC3.98□□□□□ -1.77
RPL39P62891 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 RN7SKP108-201ENST00000411367 328 ntBASIC3.98□□□□□ -1.77
RPL39P62891 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.98□□□□□ -1.77
RPL39P62891 RPL35AP3-201ENST00000414680 288 ntBASIC3.98□□□□□ -1.77
RPL39P62891 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC3.98□□□□□ -1.77
RPL39P62891 AC019205.1-201ENST00000421830 730 ntBASIC3.98□□□□□ -1.77
RPL39P62891 AC092646.1-201ENST00000427142 901 ntBASIC3.98□□□□□ -1.77
RPL39P62891 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC3.98□□□□□ -1.77
RPL39P62891 PCBP2P1-201ENST00000437262 977 ntBASIC3.98□□□□□ -1.77
RPL39P62891 RPS10P18-201ENST00000442662 495 ntBASIC3.98□□□□□ -1.77
RPL39P62891 AL031681.1-201ENST00000443304 400 ntBASIC3.98□□□□□ -1.77
RPL39P62891 BMS1P10-201ENST00000443754 1120 ntBASIC3.98□□□□□ -1.77
RPL39P62891 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC3.98□□□□□ -1.77
RPL39P62891 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC3.98□□□□□ -1.77
RPL39P62891 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC3.98□□□□□ -1.77
RPL39P62891 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC3.98□□□□□ -1.77
RPL39P62891 RN7SL269P-201ENST00000467795 305 ntBASIC3.98□□□□□ -1.77
RPL39P62891 RPS7P11-201ENST00000484240 586 ntBASIC3.98□□□□□ -1.77
RPL39P62891 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC3.98□□□□□ -1.77
RPL39P62891 AC021193.1-201ENST00000511607 420 ntBASIC3.98□□□□□ -1.77
RPL39P62891 ZNF519P4-201ENST00000514008 125 ntBASIC3.98□□□□□ -1.77
RPL39P62891 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC3.98□□□□□ -1.77
RPL39P62891 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC3.98□□□□□ -1.77
RPL39P62891 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC3.98□□□□□ -1.77
RPL39P62891 AC122688.1-201ENST00000541494 223 ntBASIC3.98□□□□□ -1.77
RPL39P62891 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC3.98□□□□□ -1.77
RPL39P62891 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC3.98□□□□□ -1.77
RPL39P62891 MRPS21P8-201ENST00000569196 235 ntBASIC3.98□□□□□ -1.77
RPL39P62891 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC3.98□□□□□ -1.77
RPL39P62891 Z93930.3-201ENST00000607919 749 ntBASIC3.98□□□□□ -1.77
RPL39P62891 AC026367.3-201ENST00000619032 590 ntBASIC3.98□□□□□ -1.77
RPL39P62891 AC089999.3-201ENST00000622440 577 ntBASIC3.98□□□□□ -1.77
RPL39P62891 FRG1EP-201ENST00000634469 770 ntBASIC3.98□□□□□ -1.77
RPL39P62891 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPL39P62891 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms