Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC090220.1-201ENST00000593078 1699 ntBASIC5.66□□□□□ -1.5
VSX2P58304 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.66□□□□□ -1.5
VSX2P58304 AC140479.2-201ENST00000421567 3130 ntBASIC5.66□□□□□ -1.5
VSX2P58304 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VSX2P58304 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.66□□□□□ -1.5
VSX2P58304 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VSX2P58304 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 RNA5SP510-201ENST00000364697 99 ntBASIC5.66□□□□□ -1.5
VSX2P58304 RNU1-59P-201ENST00000364829 162 ntBASIC5.66□□□□□ -1.5
VSX2P58304 RN7SKP269-201ENST00000365545 319 ntBASIC5.66□□□□□ -1.5
VSX2P58304 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
VSX2P58304 AC016739.1-201ENST00000405359 345 ntBASIC5.66□□□□□ -1.5
VSX2P58304 MIR1203-201ENST00000408812 85 ntBASIC5.66□□□□□ -1.5
VSX2P58304 RPS4XP5-201ENST00000419038 768 ntBASIC5.66□□□□□ -1.5
VSX2P58304 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.66□□□□□ -1.5
VSX2P58304 AC126120.1-201ENST00000431082 470 ntBASIC5.66□□□□□ -1.5
VSX2P58304 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.66□□□□□ -1.5
VSX2P58304 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.66□□□□□ -1.5
VSX2P58304 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.66□□□□□ -1.5
VSX2P58304 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.66□□□□□ -1.5
VSX2P58304 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.66□□□□□ -1.5
VSX2P58304 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.66□□□□□ -1.5
VSX2P58304 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.66□□□□□ -1.5
VSX2P58304 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 RN7SL57P-201ENST00000493687 290 ntBASIC5.66□□□□□ -1.5
VSX2P58304 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.66□□□□□ -1.5
VSX2P58304 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 RN7SKP288-201ENST00000516227 268 ntBASIC5.66□□□□□ -1.5
VSX2P58304 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 IGKV2-4-201ENST00000523070 340 ntBASIC5.66□□□□□ -1.5
VSX2P58304 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.66□□□□□ -1.5
VSX2P58304 TRIM51DP-201ENST00000529746 596 ntBASIC5.66□□□□□ -1.5
VSX2P58304 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.66□□□□□ -1.5
VSX2P58304 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.66□□□□□ -1.5
VSX2P58304 AC006530.1-201ENST00000555980 571 ntBASIC5.66□□□□□ -1.5
VSX2P58304 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.66□□□□□ -1.5
VSX2P58304 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.66□□□□□ -1.5
VSX2P58304 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 FAM27E4-201ENST00000605259 342 ntBASIC5.66□□□□□ -1.5
VSX2P58304 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.66□□□□□ -1.5
VSX2P58304 U1.25-201ENST00000614085 162 ntBASIC5.66□□□□□ -1.5
VSX2P58304 U1.34-201ENST00000618578 162 ntBASIC5.66□□□□□ -1.5
VSX2P58304 U1.31-201ENST00000620022 160 ntBASIC5.66□□□□□ -1.5
VSX2P58304 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.66□□□□□ -1.5
VSX2P58304 SNX18P12-201ENST00000624821 759 ntBASIC5.66□□□□□ -1.5
VSX2P58304 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.66□□□□□ -1.5
VSX2P58304 AP001153.1-201ENST00000641024 338 ntBASIC5.66□□□□□ -1.5
VSX2P58304 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.66□□□□□ -1.5
VSX2P58304 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 Z95114.1-201ENST00000624264 14574 ntBASIC5.66□□□□□ -1.5
VSX2P58304 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VSX2P58304 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VSX2P58304 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VSX2P58304 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VSX2P58304 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
VSX2P58304 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
VSX2P58304 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VSX2P58304 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VSX2P58304 WDR95P-201ENST00000425638 1542 ntBASIC5.65□□□□□ -1.5
VSX2P58304 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.65□□□□□ -1.5
VSX2P58304 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
VSX2P58304 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.65□□□□□ -1.5
VSX2P58304 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
VSX2P58304 RNA5SP211-201ENST00000365516 117 ntBASIC5.65□□□□□ -1.5
VSX2P58304 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
VSX2P58304 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
VSX2P58304 RNA5SP122-201ENST00000384457 108 ntBASIC5.65□□□□□ -1.5
VSX2P58304 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
VSX2P58304 RPS26P38-201ENST00000414476 348 ntBASIC5.65□□□□□ -1.5
VSX2P58304 AL035660.1-201ENST00000422041 222 ntBASIC5.65□□□□□ -1.5
VSX2P58304 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.65□□□□□ -1.5
VSX2P58304 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.65□□□□□ -1.5
VSX2P58304 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.65□□□□□ -1.5
VSX2P58304 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.65□□□□□ -1.5
VSX2P58304 AL445687.2-201ENST00000458156 728 ntBASIC5.65□□□□□ -1.5
VSX2P58304 AC084754.1-201ENST00000463466 464 ntBASIC5.65□□□□□ -1.5
VSX2P58304 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
VSX2P58304 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.65□□□□□ -1.5
VSX2P58304 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.65□□□□□ -1.5
VSX2P58304 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.65□□□□□ -1.5
VSX2P58304 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.65□□□□□ -1.5
VSX2P58304 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.65□□□□□ -1.5
VSX2P58304 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.65□□□□□ -1.5
VSX2P58304 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.65□□□□□ -1.5
VSX2P58304 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms