Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
CLDN18P56856 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN18P56856 OR52B3P-201ENST00000314715 928 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 RNA5SP211-201ENST00000365516 117 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 SNORA70H-201ENST00000383910 135 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 SNORA70J-201ENST00000384182 135 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 NPM1P37-201ENST00000403105 874 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 RNU6-233P-201ENST00000410845 141 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLDN18P56856 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN18P56856 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 AC099677.3-201ENST00000427081 395 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 AC016027.5-201ENST00000427227 210 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 BX323845.3-201ENST00000428215 527 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 AC073109.1-201ENST00000445066 978 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.34□□□□□ -1.55
CLDN18P56856 UGT2A3P7-201ENST00000510485 734 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.34□□□□□ -1.55
CLDN18P56856 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN18P56856 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN18P56856 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN18P56856 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 AC006530.1-201ENST00000555980 571 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.34□□□□□ -1.55
CLDN18P56856 COX6CP7-201ENST00000597056 208 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.34□□□□□ -1.55
CLDN18P56856 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.34□□□□□ -1.55
CLDN18P56856 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 AC018659.2-201ENST00000624690 715 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.34□□□□□ -1.55
CLDN18P56856 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLDN18P56856 AC027279.4-201ENST00000624371 2072 ntBASIC5.34□□□□□ -1.55
CLDN18P56856 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.34□□□□□ -1.55
CLDN18P56856 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CLDN18P56856 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.34□□□□□ -1.56
CLDN18P56856 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CLDN18P56856 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.34□□□□□ -1.56
CLDN18P56856 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 AC079753.1-201ENST00000623243 3868 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 MSL3P1-202ENST00000440028 1468 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
CLDN18P56856 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN18P56856 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN18P56856 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN18P56856 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 RNA5SP510-201ENST00000364697 99 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN18P56856 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLDN18P56856 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CLDN18P56856 REREP1Y-201ENST00000422655 198 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 AL731534.1-201ENST00000434711 269 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 REREP2Y-201ENST00000439103 200 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 AL512637.1-201ENST00000439523 1231 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 AL162739.1-201ENST00000450606 307 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 AP006222.1-205ENST00000450734 457 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN18P56856 ACA64.4-201ENST00000459070 127 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 AL035690.1-201ENST00000490892 383 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN18P56856 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN18P56856 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN18P56856 SNORD46.2-201ENST00000516021 102 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 AC022826.1-201ENST00000519383 805 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN18P56856 OR4A6P-201ENST00000534364 970 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 ZNF322P1-201ENST00000568013 1209 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN18P56856 MIR132-201ENST00000591554 101 ntBASIC5.33□□□□□ -1.56
CLDN18P56856 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN18P56856 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
CLDN18P56856 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN18P56856 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.33□□□□□ -1.56
CLDN18P56856 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
CLDN18P56856 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.33□□□□□ -1.56
CLDN18P56856 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.33□□□□□ -1.56
CLDN18P56856 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CLDN18P56856 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN18P56856 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms