Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.35□□□□□ -1.39
HDAC4P56524 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HDAC4P56524 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.35□□□□□ -1.39
HDAC4P56524 RNU11-201ENST00000387069 134 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 RNA5SP156-201ENST00000410250 110 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 AL096829.1-201ENST00000413677 457 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 RPS15AP30-201ENST00000420976 390 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.35□□□□□ -1.39
HDAC4P56524 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.35□□□□□ -1.39
HDAC4P56524 AC023141.3-201ENST00000436698 278 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 TIMM8BP2-201ENST00000445940 251 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 AC118758.1-202ENST00000454719 225 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 RN7SL254P-201ENST00000460609 284 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 SLC25A51P1-201ENST00000468432 871 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 MAST4-IT1-201ENST00000514241 658 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 SNORA70.11-201ENST00000515987 138 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 SNORA70.13-201ENST00000516116 138 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 AC008429.4-201ENST00000521201 182 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.35□□□□□ -1.39
HDAC4P56524 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.35□□□□□ -1.39
HDAC4P56524 MTND2P17-201ENST00000550281 688 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 AC067805.1-201ENST00000559344 470 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 NDUFA5P11-201ENST00000567995 343 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.35□□□□□ -1.39
HDAC4P56524 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 AC245128.3-201ENST00000594721 748 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.35□□□□□ -1.39
HDAC4P56524 AL360012.1-201ENST00000602813 131 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
HDAC4P56524 AL591926.1-201ENST00000620542 217 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.35□□□□□ -1.39
HDAC4P56524 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 AC012078.1-201ENST00000405035 1646 ntBASIC6.35□□□□□ -1.39
HDAC4P56524 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HDAC4P56524 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HDAC4P56524 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.35□□□□□ -1.39
HDAC4P56524 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.34□□□□□ -1.39
HDAC4P56524 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.34□□□□□ -1.39
HDAC4P56524 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC4P56524 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC4P56524 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC4P56524 RNA5SP232-201ENST00000364144 119 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 RNU105B-201ENST00000364478 208 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
HDAC4P56524 RNA5SP122-201ENST00000384457 108 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 GCNT1P4-201ENST00000404096 329 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 MIR1275-201ENST00000408770 80 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC4P56524 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.34□□□□□ -1.39
HDAC4P56524 RPL35AP31-201ENST00000418340 337 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.34□□□□□ -1.39
HDAC4P56524 AC130360.1-201ENST00000425489 1117 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 RPS10P18-201ENST00000442662 495 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.34□□□□□ -1.39
HDAC4P56524 ZNF619P1-201ENST00000446539 752 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 NDUFA5P8-201ENST00000449019 346 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 HMGB1P7-201ENST00000450921 612 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 PPIAP7-201ENST00000454070 489 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 RAB28P2-201ENST00000454299 641 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 CTSLP6-201ENST00000458273 1002 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 AC104849.1-201ENST00000462623 405 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.34□□□□□ -1.39
HDAC4P56524 OR52A4P-202ENST00000481634 799 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC4P56524 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.34□□□□□ -1.39
HDAC4P56524 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.34□□□□□ -1.39
HDAC4P56524 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.34□□□□□ -1.39
HDAC4P56524 TPM3P3-201ENST00000521343 354 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 AC130365.2-201ENST00000525882 1201 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 AP000620.1-201ENST00000527147 504 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 AC025423.2-201ENST00000537570 439 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 AL049874.4-201ENST00000557593 255 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 AC007494.1-201ENST00000562293 760 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.34□□□□□ -1.39
HDAC4P56524 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.34□□□□□ -1.39
HDAC4P56524 RN7SL753P-201ENST00000581238 290 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.34□□□□□ -1.39
HDAC4P56524 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HDAC4P56524 AC124916.2-201ENST00000604416 224 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 AL356752.1-201ENST00000615844 593 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 AC103798.2-201ENST00000624292 632 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.34□□□□□ -1.39
HDAC4P56524 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms